Chryseobacterium rhizoplanae: KB553_20380
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Entry
KB553_20380 CDS
T08349
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
crhi
Chryseobacterium rhizoplanae
Pathway
crhi01501
beta-Lactam resistance
crhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
crhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KB553_20380
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KB553_20380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crhi02000
]
KB553_20380
01504 Antimicrobial resistance genes [BR:
crhi01504
]
KB553_20380
Transporters [BR:
crhi02000
]
Other transporters
Pores ion channels [TC:
1
]
KB553_20380
Antimicrobial resistance genes [BR:
crhi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KB553_20380
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
KB553_20380
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
KB553_20380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UCA59352
LinkDB
All DBs
Position
4492890..4494347
Genome browser
AA seq
485 aa
AA seq
DB search
MNMMENSKTKNIIAAIALSLVLASCKAPMATVIKDEVKENIPQNFNQEEPQDANNNSGTT
PWRQFFTDPNLVSLIETALKNNQELMITLQEIEIAKSGVLAKKGRLTPTVSAGIGAGLKK
AGRYTSEGAGDASTEMEPGRKIPDPLGNFEGGLMANWEIDIWKKLRTEKESAVVHYLSTV
EGKNFVLSLLIEEVANNYYELLALDNQLDIIQQYIKLQQRALEISKIQKEAAAATELAVK
KFEAELAKSKASEYTIRQQITEKENEINALLGRYPQPIVRAKENFMSTIPPTVYTGIPSQ
LLANRPDIKQAELELKASKLDVEAARKEFYPSLEISATLGLEAFKPSYLVKMPESIAYNL
VGEMAGPLINKSAIKANFQAADAKQIQALYEYDKTILNAYLDVANLMSKIKNIDQYYQLK
SQETKALDQSIDIANQLFRNSRADYLEVLLNQRDALDAKMELIEAKQKQLNAVVDIYKSL
GGGWK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgatggaaaattcgaagactaaaaatataatagcagccattgccttatctctt
gttttagcaagctgtaaggctccaatggcaaccgtcataaaagacgaagtgaaagagaat
atccctcagaacttcaaccaggaagaacctcaggatgctaataataatagtggaacaact
ccatggaggcagttttttaccgaccccaatctggtaagccttattgaaacggctttaaag
aataaccaggagcttatgattacgcttcaggaaattgaaattgctaaaagtggggttttg
gctaaaaaaggaagactaacgcccaccgtttctgcgggaataggggctggattgaaaaaa
gcaggccgatatacgagtgaaggagccggggatgcaagtactgaaatggagccgggaaga
aagataccggatcctcttggtaactttgaaggaggtttaatggctaactgggaaatagat
atctggaagaaattaagaacagaaaaggaatctgcagtggtacattatctttccacagta
gaagggaaaaactttgttctgtctctccttattgaggaagtagctaataattattacgaa
ttattggcgcttgataatcagttagatattattcaacaatatatcaagctgcagcaaagg
gctttggaaatttccaaaattcagaaagaagctgccgcagcaacggaattagcggtgaag
aagtttgaagccgagctggctaaatcaaaagcttcagaatatacgatccgacagcagatt
acggaaaaggagaatgagatcaatgctttattgggaagatatccacagccgattgtcaga
gcaaaggaaaactttatgtcaactattccgccaacggtgtatacagggattccttcacaa
ttgctggccaatcgtcctgatattaaacaggcagagttggaattgaaggcatcaaaactg
gatgtggaagcggcaagaaaagaattctatccatccctggagatttctgctactttggga
ttagaggcatttaagccatcttatctggtaaaaatgccggaatctattgcttacaatctt
gtaggtgagatggcagggccactgattaataagagtgctataaaagcaaacttccaggca
gcagatgccaaacagattcaggcattgtatgaatatgataaaactattttgaatgcttat
ctggacgtagccaatctgatgtcgaagattaagaatatagatcagtattatcaattaaaa
tctcaggaaacaaaagctctggaccagtctattgatattgccaaccagttattcagaaat
tccagagcagattatcttgaagtcctattgaatcaaagggatgctttggatgctaaaatg
gagcttatagaagcgaaacaaaaacagctgaacgctgtagtagacatttataaaagtctg
ggcggcggctggaaataa
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