Chitinophaga sancti: SIO70_25675
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Entry
SIO70_25675 CDS
T09582
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
csac
Chitinophaga sancti
Pathway
csac01501
beta-Lactam resistance
csac01503
Cationic antimicrobial peptide (CAMP) resistance
csac02020
Two-component system
csac03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SIO70_25675
09132 Signal transduction
02020 Two-component system
SIO70_25675
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SIO70_25675
01503 Cationic antimicrobial peptide (CAMP) resistance
SIO70_25675
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csac02000
]
SIO70_25675
02044 Secretion system [BR:
csac02044
]
SIO70_25675
01504 Antimicrobial resistance genes [BR:
csac01504
]
SIO70_25675
Transporters [BR:
csac02000
]
Other transporters
Pores ion channels [TC:
1
]
SIO70_25675
Secretion system [BR:
csac02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SIO70_25675
RTX toxin transporter
SIO70_25675
Multiple protein transporter
SIO70_25675
RaxAB-RaxC type I secretion system protein
SIO70_25675
Antimicrobial resistance genes [BR:
csac01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
SIO70_25675
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
SIO70_25675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF1657
Deltameth_res
Motif
Other DBs
NCBI-ProteinID:
WPQ61755
LinkDB
All DBs
Position
complement(6355047..6356441)
Genome browser
AA seq
464 aa
AA seq
DB search
MKNINHLFKNSCAGYLQYEFLIMKNNSKYNALVSLSLAVLAGSSLFTSAYGQVRVEKRLS
VAEMFALADSNSTQIRLSEEGINEAAARFEEAKANKLPSLKFSATAGYLGNAEVISYEDP
LPSGSYEMPHFSNSFGLEASYVIYAGGALTKLVDLAGFQKNIASLNYEKDKMDVRLYLVA
NYIDLYVAQNHKKVYEKNIEQTQKLLDMMVNRLAKGVALRSDILRTQLQLSNYTFGLSKI
ENRISILNKRLVETLALSEGTQLIAEEIGVQREINELETSSLGSNVELRQADVKVSIAQK
GVEISKAKNSPVFSLYASSNMSRPFVYDLPPLDLYANIWTAGMSLTYNIDGLFKNTKAIK
RAKTQLSESKLSQKLTREHVELDYHENIVNCTESREQLKVAKKDLELATDNYNLVVNRYN
TQLALITDLMDASASKLRAELQLQNARAAIAFAVYKVQRILGNL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaatattaatcatttgttcaaaaatagctgtgcaggatatttgcagtatgaattt
ttgataatgaaaaacaattcaaagtataatgcattagtgtctctaagccttgctgtgtta
gcgggcagctcgttgttcacttcagcttacgggcaagtacgggtcgagaaaagacttagt
gtcgcagagatgtttgcgcttgcggattccaacagtacgcagatcaggttgtcggaggag
ggaataaatgaagccgcagcccgattcgaagaggccaaagctaataaacttccttcactt
aaattttccgctacagcgggttaccttgggaacgcggaggttatcagctatgaagaccca
ctgccgtccggctcttatgagatgcctcatttttccaattctttcgggctggaggcttcc
tatgttatttatgcggggggagccctgacaaagctcgttgacctggcagggttccaaaaa
aatattgcatccctaaattatgaaaaggataagatggatgtcagactttacctggtggca
aactatatcgacctctacgtcgcccaaaaccacaaaaaggtatatgaaaaaaatatagaa
cagacccagaagttacttgatatgatggtaaatcggcttgctaaaggggttgccctgcgc
agtgacattcttcgtacccagcttcagctttcgaattatactttcggcctatcgaaaatt
gaaaaccgtataagtatcctaaataaacgacttgtggaaactcttgcactttctgaaggt
acacagttaattgctgaagaaattggcgtgcaaagggagatcaacgaattagagacatcg
tcattgggaagtaatgttgaattgcggcaagcagatgtaaaggtatctattgcccaaaaa
ggtgttgaaatctctaaggcaaaaaatagtccggttttctccttatatgcgagtagtaac
atgtcgcggccatttgtttatgaccttcctccgcttgacctgtatgccaatatctggact
gccgggatgtcactgacttataatattgacggtctttttaaaaacacaaaggccataaag
cgtgccaaaacacagctttccgagagcaagctttcgcagaaactgacacgtgagcatgtg
gagctagactaccatgagaatattgttaattgtactgagagccgcgaacaattgaaggtc
gctaaaaaggaccttgagctggcaacggataactataatttggtcgtaaaccgctacaac
actcaactggccttaattacagaccttatggatgccagtgcttcaaaactcagggctgag
ctacagttacagaacgccagagctgctattgcttttgccgtatacaaagttcagaggata
ttagggaatttataa
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