Chitinophaga sancti: SIO70_27080
Help
Entry
SIO70_27080 CDS
T09582
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
csac
Chitinophaga sancti
Pathway
csac01501
beta-Lactam resistance
csac01503
Cationic antimicrobial peptide (CAMP) resistance
csac02020
Two-component system
csac03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SIO70_27080
09132 Signal transduction
02020 Two-component system
SIO70_27080
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SIO70_27080
01503 Cationic antimicrobial peptide (CAMP) resistance
SIO70_27080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csac02000
]
SIO70_27080
02044 Secretion system [BR:
csac02044
]
SIO70_27080
01504 Antimicrobial resistance genes [BR:
csac01504
]
SIO70_27080
Transporters [BR:
csac02000
]
Other transporters
Pores ion channels [TC:
1
]
SIO70_27080
Secretion system [BR:
csac02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SIO70_27080
RTX toxin transporter
SIO70_27080
Multiple protein transporter
SIO70_27080
RaxAB-RaxC type I secretion system protein
SIO70_27080
Antimicrobial resistance genes [BR:
csac01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
SIO70_27080
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
SIO70_27080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WPQ62029
LinkDB
All DBs
Position
6748983..6750323
Genome browser
AA seq
446 aa
AA seq
DB search
MEQLIKIHLTIWLVCCSLCLSAQRHLSLEECTDIALKQSLQVKSDVLDLDKTSASIKQAY
SALLPTIGINGAYQYSPQVQASVIPSETFGGTSGTFSAVKLGVPQTKSATAELNQNIYNP
SAIIALKAAKVLLQGNKLQIKSSKEDLVYNVAATYYNIQSLLKQEEMTSQNLHNTQSLLD
STIAQFQAGLATQTDVDRLQVTHDNSEADLERLHNNKEKYYNLLKVLMNLPLNENILVNP
IPENESPSLSTDNYNLAQKTNYLQILQNKQTAELEFKNIKSGYQPTISFFANYGVYGYYS
NANPLNNINDKWYPTSTIGIKMKLTLFDGFNIKYQAKQKKIEISKLDVQAAQTLQQNQKE
VADAMADLKSNMLTYQNQQRNLVLAQKVLADINLQYLSGIAKVSDVINATTDLQTAQNNF
ISAQINIKQAQISLKKAQGTLLPQSF
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaacaattgattaaaattcacctcaccatctggttggtttgttgttcgctctgtcta
tcggcacaacgccacctatcgctggaagaatgcaccgacatcgccctgaaacaaagcctt
caggtaaaatctgatgtattggaccttgacaaaacttccgcatccataaaacaagcttat
agcgctctgttacccaccattggcataaacggtgcttatcaatattccccccaggtacaa
gcatctgtcatcccctctgaaacattcggcggcacctcaggcaccttcagcgctgtaaaa
ctaggtgtcccacaaaccaaatctgcgaccgcagaacttaaccagaacatctacaacccc
tctgccattatcgccctcaaagcagccaaagtgctgctccagggcaataaactacaaatc
aaaagcagcaaagaagaccttgtctacaatgttgccgctacttattataatatccagtcc
ttactgaaacaggaagaaatgaccagccagaacctgcataacacccagtccctgctggac
agcaccattgctcagtttcaggccggcctcgccacccagacagatgtggaccgcctccag
gttacacacgacaatagcgaagccgacctcgaacgccttcacaacaacaaagaaaaatat
tacaacctcctgaaagtacttatgaacttgcccctgaatgaaaacatcctggtcaatcca
atccctgaaaacgaatccccctcgttgtctactgacaactacaacctcgctcagaaaaca
aactacctgcaaatcctgcagaacaaacaaaccgctgaactggaatttaaaaacattaaa
tccggctaccagcctaccatctccttctttgccaactatggcgtatacggctattacagc
aatgccaacccattgaataatattaatgataaatggtaccccacctctacaataggaatc
aaaatgaaattaaccctctttgacgggttcaatatcaaataccaggcaaaacaaaaaaag
attgaaatcagcaaacttgatgtccaggccgcccaaactttacaacaaaaccaaaaggaa
gtagccgatgccatggctgatcttaaaagcaatatgctcacttatcaaaaccaacaacgt
aacctggtacttgcacaaaaagtattggcagatatcaacctccagtacttaagcggtatc
gcaaaagtgagtgatgtcatcaacgccaccaccgatctgcaaaccgcacaaaacaatttc
atctccgcccagatcaatatcaaacaggcccagatcagcctgaaaaaagcacagggcacc
ttattaccacagtcattctaa
DBGET
integrated database retrieval system
