Clostridium saccharolyticum WM1: Closa_3484
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Entry
Closa_3484 CDS
T01288
Name
(GenBank) integral membrane sensor signal transduction histidine kinase
KO
K18345
two-component system, OmpR family, sensor histidine kinase VanS [EC:
2.7.13.3
]
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh01502
Vancomycin resistance
csh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Closa_3484
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Closa_3484
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csh01001
]
Closa_3484
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
csh02022
]
Closa_3484
01504 Antimicrobial resistance genes [BR:
csh01504
]
Closa_3484
Enzymes [BR:
csh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Closa_3484
Protein kinases [BR:
csh01001
]
Histidine kinases
OmpR family
Closa_3484
Two-component system [BR:
csh02022
]
OmpR family
VanS-VanR (VanB type vancomycin resistance)
Closa_3484
Antimicrobial resistance genes [BR:
csh01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
Closa_3484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c
HisKA
HAMP
HATPase_c_2
HATPase_c_5
DUF6033
DUF5659
EHN
Motif
Other DBs
NCBI-ProteinID:
ADL06010
UniProt:
D9RA38
LinkDB
All DBs
Position
complement(3750356..3751894)
Genome browser
AA seq
512 aa
AA seq
DB search
MKHSIKARFAVIFVCLMAFVLVSTWCVNNWFLESFYTSDKVHTLEKAYMQIDRVVEQANE
SGKGIIEYYKDTYDPDFKNEGPAQKMFRTMGEKYNLMMVLIDSTTDEVLMLTNGDQQFLK
NRVEAYIFGKNVPEASILKKHDNYIVQKTYDRRSDSYYLESWGYFSDNKTIFLISVPLAS
IRESVDLANRFLAYVGVAALFVGSMFIYLATKRIVSPILQLANLSEKMSALDFEAKYTGK
EEDEVGVLGNSMNQLSDTLKDTIGQLRAANEKLQKDIDEKIKIDEMRKDFIANVSHELKT
PIALIQGYAEGLTEGMAEDPDSRDYYCGVIMDEAGKMNTMVRQLLNLTALEFGNDSIQPE
RFDLTELIRGVIGSAGILIQQKAAEVKLEEGGPIYVFADEFKIEEVITNYLNNALNHLEG
ERKIVITAEENGEEALVTVFNTGQNIPEEDLPNLWTKFFKVDKAHTREYGGSGIGLSIVK
AIMDSHGKSCGVRNVKGGVEFWFTLDCEKENL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaagcattccatcaaggcgcgttttgccgtaatatttgtatgtctgatggcctttgtc
cttgtttccacatggtgtgtaaacaactggtttctggagagcttttacactagtgataag
gtgcatactctggaaaaagcctatatgcagatcgacagggtagtagaacaggccaatgag
agcgggaaaggaatcatcgaatattacaaggatacctatgacccggactttaaaaatgaa
ggcccggcccagaagatgttccggaccatgggggaaaaatacaatctgatgatggttctc
attgacagcactacagacgaggtccttatgttaacaaacggagaccagcagtttttaaaa
aacagggtggaggcctatatattcgggaaaaacgtgcctgaagccagcattttaaaaaag
catgacaattatattgttcagaaaacctatgacaggcgttctgattcatattatctggaa
agctgggggtatttttccgataataaaaccatttttctcatttctgttcctctggccagc
atcagggaaagtgtggatcttgccaaccggtttctggcctatgtgggcgttgccgctctg
tttgtaggcagtatgtttatatatcttgcgacaaaaagaatagtatctcctattcttcag
cttgccaatttgtcagaaaaaatgtcggcccttgactttgaagccaaatataccggcaaa
gaggaagatgaggtgggagtgctgggcaacagcatgaaccagttatccgataccttaaaa
gataccatcggacagctgcgggctgcgaatgaaaaattgcagaaggatattgacgaaaag
ataaaaatagatgagatgcggaaggattttattgccaatgtttcccacgaattaaagact
cctattgcattgatccaggggtatgctgagggcttgacggaggggatggcagaggatccg
gacagcagggattattactgcggggtcatcatggatgaagcgggtaaaatgaataccatg
gttcgccagcttctcaatcttactgcccttgaattcggcaatgacagcattcagccggaa
cgcttcgatttgacggaactgatccgtggcgtcattggttctgccggtatcttaatccag
caaaaggctgcagaggtaaagctggaagagggcggtccaatctatgtattcgccgatgaa
tttaaaatagaagaggtcattacaaactatttaaacaatgcactcaaccatttagaggga
gaacgaaagatcgtgattaccgcagaagaaaacggagaggaagccttagtcaccgtattc
aacaccggacagaatattccggaagaggatttgccaaatctctggaccaagttttttaag
gtagataaggcacataccagggagtatggaggaagtggtatcggactctctatagttaag
gcgattatggattcccatgggaagtcctgcggtgtccggaatgtaaaaggcggcgtggaa
ttttggtttaccctggactgcgagaaagaaaatctttga
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