Chryseobacterium shandongense: EG350_12605
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Entry
EG350_12605 CDS
T05920
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
csha
Chryseobacterium shandongense
Pathway
csha01501
beta-Lactam resistance
csha01503
Cationic antimicrobial peptide (CAMP) resistance
csha02020
Two-component system
csha03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
EG350_12605
09132 Signal transduction
02020 Two-component system
EG350_12605
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EG350_12605
01503 Cationic antimicrobial peptide (CAMP) resistance
EG350_12605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csha02000
]
EG350_12605
02044 Secretion system [BR:
csha02044
]
EG350_12605
01504 Antimicrobial resistance genes [BR:
csha01504
]
EG350_12605
Transporters [BR:
csha02000
]
Other transporters
Pores ion channels [TC:
1
]
EG350_12605
Secretion system [BR:
csha02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
EG350_12605
RTX toxin transporter
EG350_12605
Multiple protein transporter
EG350_12605
RaxAB-RaxC type I secretion system protein
EG350_12605
Antimicrobial resistance genes [BR:
csha01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
EG350_12605
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
EG350_12605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AZA57971
LinkDB
All DBs
Position
complement(2831220..2832530)
Genome browser
AA seq
436 aa
AA seq
DB search
MVQNIKTILYLMIAVCPALYFSQEIKQLTANEVAELALHNHQQLKVSAQNIDIAKQNTNV
VKLQKLPNITASTSQFYLGDVVAIDKDFSNSTNVPMPHYGSSYGVQATQLIFKGGLVNKS
IEMAGLREQLSELDLEKNKQDVKLLVISNYLDVYKIVNQENVFQNNKKLAQERLKNIQKF
YQQGMVTRNEVIRGELAIKNLDQGILTLANNRKILNYNLIIALGLSSDTEIVPVENLENK
ESGIGIDYYLNLAHDNNPLLKSAQANVNVADKNIEIIKTDKMPTISGFGGYSLQRPITTR
NPVLDMYSGGWQTGISLSYNIDNLYKTKERVKLGELQKNQANDAVTLTQQNVDMAVNAAY
IKYQEAIQQAEILNDAKKLAEENYKITEAKYLNQLAVQAEMIDAQNQKLQSELDYANAEI
NVLYQYYNLLKSTGTL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggtacagaatataaaaacaatactgtatttgatgatagcagtttgtcctgcactgtat
ttttcacaggaaataaaacagttgacagcgaatgaagtggcggaacttgcccttcataat
catcagcagctgaaagtttcggcacaaaatattgatatcgcaaaacagaatacaaatgtt
gtaaaacttcagaagcttcctaacattaccgcttctacaagtcagttttatttaggtgat
gttgtagcgatcgataaagatttttcaaattcgaccaacgttccgatgccccattatgga
agttcgtacggagttcaggcaacccagctgatctttaaaggcggtttggtgaacaaatct
attgaaatggcagggcttcgtgaacagctttccgaactggatctggagaaaaacaaacag
gatgtaaagcttctggtgatctccaattatcttgatgtttataaaatcgtaaaccaggaa
aatgtttttcagaataacaaaaaactggctcaggaaaggcttaaaaatattcaaaaattc
tatcagcagggtatggttacccgtaatgaggtgatccgtggtgagcttgctattaaaaat
cttgatcagggaattcttacgttagctaacaatagaaaaattcttaattacaatcttatt
atagctctcggattgtcttcggacacggaaatcgttcccgttgaaaatcttgagaacaaa
gaatcaggcattggtattgactattatctgaatcttgctcatgataacaatcctttactg
aaatctgcacaagccaacgtgaatgttgccgacaaaaatatagaaatcattaaaaccgat
aagatgcctaccatttcaggctttggaggatacagtttacagagaccgataaccaccaga
aatcctgttttggatatgtattccggaggatggcaaaccggaatttctttgagctataat
attgataatttatataagaccaaagaacgcgtaaagcttggtgaacttcaaaaaaaccag
gccaatgatgcggtaaccctgacacagcagaatgtagatatggctgtaaatgcagcttat
atcaagtaccaggaagcgattcagcaggctgagattcttaatgatgctaaaaaattagca
gaagaaaactacaagattacagaagccaaatatctgaatcagcttgcggttcaggcggaa
atgatcgatgcgcagaatcagaaattacaatcggaattagattatgccaatgcagagatc
aatgtgctgtatcaatattacaatctgctgaaatcaacaggaacattataa
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