Comamonas squillarum: N4T19_08675
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Entry
N4T19_08675 CDS
T10846
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
csqu Comamonas squillarum
Pathway
csqu01501
beta-Lactam resistance
csqu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
csqu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N4T19_08675
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
N4T19_08675
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csqu02000
]
N4T19_08675
01504 Antimicrobial resistance genes [BR:
csqu01504
]
N4T19_08675
Transporters [BR:
csqu02000
]
Other transporters
Pores ion channels [TC:
1
]
N4T19_08675
Antimicrobial resistance genes [BR:
csqu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
N4T19_08675
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
N4T19_08675
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
N4T19_08675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF1722
Motif
Other DBs
NCBI-ProteinID:
UXC20166
LinkDB
All DBs
Position
complement(1849577..1851019)
Genome browser
AA seq
480 aa
AA seq
DB search
MTPSLDLSYSFRAPLLRSLALALCCAGLLSACSVAPVYQVPATPAPASFKEAGALWQSAQ
PNDAVDRGDWWTLFADEPLNQLAARVQVHNQNIAAAAAAVQQAQAALRVEQAGLLPTVSG
SLGQTRQGGSQSSSNGSASLGISAAWDADLWGRLRESVSAAQSSAQASEADLAAARLSAV
GSLVQNYFRLREADAEMQILLQSIEGYQRSLLIAQNRYDVGVEARTAVLQAQTTLTNTQA
SVESLRQSRQTYEHAIAVLTGQAPAQFDLPPAAWNVTVPEIPGMVPSTLLERRPDIAAAE
RAVAAANAQIGVAQAAYYPSLGLSGSLNRSGSNIGNLFSASGLLWSLGASLSQSIFNAGA
TTAQVDSARAAHAARTASYRQSVLAAFQAVEDVLSNVAALNAQKPLLQQSLDSAEKVEQQ
MLNRYKEGQVPYTDVVTAQATALSARRSLIQLQLNQQLAAAQLIQELGGGWHADWMKPGA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgacgccttctcttgatctttcctattcttttcgtgcccccctgctgcgcagcctggcg
ctggcgctatgctgcgcagggctcttgagcgcctgctcggtggcccccgtctaccaggtg
cccgccacgccagcgccagccagcttcaaggaagcgggcgcgctgtggcaaagcgcccag
cccaacgatgcggtggaccggggcgactggtggacgctgtttgcggacgagccgctcaac
cagctcgctgcccgggtgcaggtgcacaaccagaacattgccgcggctgctgccgctgtg
cagcaagcccaggccgcgttgcgcgtggagcaggccggcttgctgccgaccgtcagtggc
agcctgggccagacgcgccagggtggcagccagtccagcagcaatggcagtgcctcgctg
ggcatcagcgccgcctgggatgcagacctgtggggccgcctgcgcgaatcggtgagcgcc
gcccaaagcagtgcccaggcgagcgaagccgatctggccgctgcgcgcctgtcggccgtg
ggcagcctggtgcagaactatttccgcctgcgcgaggccgatgccgagatgcagatcctg
ctgcaatcgatcgagggttaccagcgcagcctgctgattgcccagaaccgctacgacgtg
ggggtggaggcgcgcacggcagtgctgcaggcgcagaccacgttaaccaatacccaggcc
agcgtggagtccctgcgccaatcgcgccagacctacgagcatgcgattgccgtgttgacg
ggccaggcgccggcgcagtttgacctgccgcccgccgcctggaacgtgaccgtgcccgag
attccgggcatggtgccatcgaccctgctggagcgccggcccgacattgccgctgccgag
cgcgcggtggctgctgccaatgcccagatcggcgtggcccaggcggcctactacccgagc
ctgggcctgagcggctcgttgaaccgctcggggtcgaacatcggcaacctgttcagcgcc
tcgggcctgctgtggtcgctgggcgcatcgctgagccagagcattttcaacgccggcgcc
actaccgcgcaggtcgattcggcccgcgccgcgcatgcggcccgcacggccagctaccgc
cagtcggtgctggcggcgttccaggcggtcgaagatgtgctgagcaatgtggcagcgctc
aatgcccaaaagccgctgctgcagcaaagcctcgattctgccgagaaggtcgagcagcag
atgctcaaccgctacaaggaaggccaggtgccctataccgatgtggtcaccgcccaggcc
acagcgctgtcggcacgccgatccttgatccagctgcagctgaaccagcaactggcagcg
gcccaactcatccaggagctggggggcggctggcatgccgattggatgaagccgggcgcc
taa
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