Clostridium thermosuccinogenes: CDO33_10300
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Entry
CDO33_10300 CDS
T05300
Name
(GenBank) hypothetical protein
KO
K18345
two-component system, OmpR family, sensor histidine kinase VanS [EC:
2.7.13.3
]
Organism
cthd
Clostridium thermosuccinogenes
Pathway
cthd01502
Vancomycin resistance
cthd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cthd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CDO33_10300
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CDO33_10300
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cthd01001
]
CDO33_10300
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cthd02022
]
CDO33_10300
01504 Antimicrobial resistance genes [BR:
cthd01504
]
CDO33_10300
Enzymes [BR:
cthd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
CDO33_10300
Protein kinases [BR:
cthd01001
]
Histidine kinases
OmpR family
CDO33_10300
Two-component system [BR:
cthd02022
]
OmpR family
VanS-VanR (VanB type vancomycin resistance)
CDO33_10300
Antimicrobial resistance genes [BR:
cthd01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
CDO33_10300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c
HisKA
HAMP
HATPase_c_2
HATPase_c_5
ATG17_like
DUF1664
CCDC39
NYD-SP28
ZapD
Rbsn
Motif
Other DBs
NCBI-ProteinID:
AUS96796
UniProt:
A0A2K2F992
LinkDB
All DBs
Position
complement(2361538..2362992)
Genome browser
AA seq
484 aa
AA seq
DB search
MFILAISARSLVQIILKQSEGWDTKLLRRIKSSLNAKTFIIIATLLILSGVLIYTLVFIY
MPKTYRIELNKRFNANFRTLIETLNEDNGQNTERYLQNFCISNNTSVYVTDKNLNIIYSI
QAEGMDANTMPEMTDDNVTFLSGVYKCNGEDYIVSAYAKMDQIDQVSDTLMSLLPFVFIF
ILGISLLGSLISSRALTKPIIEISKISKKLSELNLTWFCDVKRTDEIGSLAGNLNEMAKK
LDKALSDLKSANENLQKEIKRRDDLFMAISHEFKTPVTVMRCDLEGMLHNIGRYKDREKY
LKHALQVTESMESLIQEILQVGQIGSDTDMLEKTPTDLYALVYECCNMYQELALKKKIDI
LCKCDKNVISDVDPSHMLKAVSNIIGNAVHHSPERQTVIVSLKKANETATLTVENTGVHI
ASDEFDHIFEPFCRVDKSRNRHTGGSGLGLYIVKVILEAHQLHYTFKNTEQGVRFEIIFP
LSYN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgttcatattggcaatatccgcaagaagcttggtgcagattatattgaaacaatcagag
gggtgggatacaaaattgcttcggaggattaaaagcagcctgaatgcaaaaacctttatc
atcattgccaccttgctgattttgtccggtgtacttatttacacacttgtttttatctat
atgcctaagacgtacagaattgagctgaataaaagatttaatgcgaatttcagaacgctg
atagaaacgttaaatgaagacaacggtcagaacaccgaaaggtatttacagaatttttgc
atatcgaacaataccagtgtttatgttacggacaaaaacttgaatatcatatattccatc
caggctgagggcatggatgctaacactatgcccgaaatgacggatgataacgtaacattc
ctctcaggagtatataaatgcaatggtgaggattatatcgtttcagcctatgctaaaatg
gatcaaatcgatcaggtgagtgataccctgatgagcctgcttccttttgtatttatcttt
atcctgggcatatccttattaggtagcctcatttcctccagagctttaaccaaaccgatc
atagagatcagcaaaatatctaaaaagctgtcagaattaaatcttacgtggttttgcgat
gtaaaacgtactgacgagattggctctcttgccggcaatttgaatgaaatggcaaagaag
cttgataaagcgctttctgacttgaaatcagccaatgagaatctccaaaaggagataaaa
cggcgcgatgacttgtttatggcaatatcccatgagtttaaaacgcctgttactgtcatg
cgctgcgacctggagggcatgttgcataatatcgggcgatataaggatagagagaagtat
ttgaagcatgctttgcaagtaacggagtcaatggaatcgcttatacaagaaatattacag
gtaggtcaaatcggttcagataccgatatgctggagaagacgcccactgatttgtatgca
ttggtatacgaatgctgcaatatgtatcaggaattagctctcaaaaagaaaattgatatt
ctgtgtaaatgcgataagaacgtcatttcagatgttgatcccagccatatgctgaaagct
gtttccaatattattggcaatgcggtacaccactctcctgaaaggcaaaccgttatagtt
tctttgaaaaaagcaaatgaaaccgcaactttaacggttgagaataccggggttcatatt
gcatcggacgagtttgaccatatttttgagccattttgtagagtggataaatcccgtaac
cgccatactggcggcagcggcttgggattatatattgtaaaggtcatacttgaagcgcat
caacttcattatacatttaaaaatacggagcaaggcgttcggtttgaaattatattcccg
ctatcctataattga
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