Comamonas thiooxydans: CtCNB1_2213
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Entry
CtCNB1_2213 CDS
T01109
Name
(GenBank) RND efflux system, outer membrane lipoprotein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
ctt
Comamonas thiooxydans
Pathway
ctt01501
beta-Lactam resistance
ctt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CtCNB1_2213
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CtCNB1_2213
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ctt02000
]
CtCNB1_2213
01504 Antimicrobial resistance genes [BR:
ctt01504
]
CtCNB1_2213
Transporters [BR:
ctt02000
]
Other transporters
Pores ion channels [TC:
1
]
CtCNB1_2213
Antimicrobial resistance genes [BR:
ctt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CtCNB1_2213
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
CtCNB1_2213
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
CtCNB1_2213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ACY32959
LinkDB
All DBs
Position
2526085..2527533
Genome browser
AA seq
482 aa
AA seq
DB search
MKNAFHTVRVLPLALALLMAGCSVPSLTRAPDSAQPAVPASWSAERAAGAAGAVQTDWWQ
AFGDAQLSRWVELALARNNDVLTALARVEEARANLDVTGSAAAPQLSLSAPGSANRSLSA
RTGQMVHVRSAQPVLQASWELDLWDRLGSLSRAADQRLQASQADRDAMRLTVAATVAQAY
IALRSLQAQLAVAEDTVKSREDAVRLLTDQVRVGYISQLQQSQALAELESVRQSVQQLSL
ALQRQRIALMQLAGGNGDDQAQALARSSLSVRAGLESMSLPAMPAPGLPSGLLERRPDIA
RAQLLLAASDSNLAAQRAAFLPQVSLSANFGSLFINALDYNPARVWSLGGSILAPLFNGG
RLQGQFDAASAQRDQAAYAYRGVVIKAFGDVETALVSSQQLQAQWEHAKEREKVLGRTLG
FAKDRYEAGYASYLEELDAQRNLFAVQQEVLRLRQSQLENAVALYQALGGGWQLADTTAP
QS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacgccttccataccgtgcgtgtcttgcccttggcgcttgcattgctgatggct
ggctgcagcgtgcccagtctgacccgggccccggacagcgcccagcctgcagtgccagcc
agctggagcgcggaacgtgccgcaggtgctgccggcgcagttcagaccgattggtggcag
gcctttggcgatgcgcagctgagtcgctgggtggagctggcgcttgcgcgcaacaacgat
gtgctcaccgccctggcccgggtggaggaggcacgtgcgaatctcgatgtgacgggctcg
gcagctgcgcctcagctgtcgcttagcgcgccgggctcggccaaccgcagcctgagcgca
cgaaccggccagatggtgcatgtgcgttcggctcagcccgtgctgcaagcgagctgggag
ctggatctctgggatcgcctgggcagtctgagccgggccgccgatcagcgcctgcaggcc
agccaggcggatcgcgacgcgatgcgtctgacggtggccgcgaccgtggcgcaggcctat
atcgctctgcgctcgctgcaggcccaactggccgtggccgaggacacggtgaagtcgcgc
gaggacgcggtgcgtctgctcaccgaccaggtgcgtgtgggctatatctcgcagctgcag
caaagccaggcgctggccgagctggaaagcgtgcggcaatcggtgcagcagctgtctctg
gcgctgcagcgccagcgcatagcactgatgcagctggcgggcggaaacggtgatgaccag
gcacaggccctggcccgttccagcttgagcgtccgtgccggactcgagtccatgagcctg
cctgccatgcctgcacctggcttgccgtcgggcttgctggagcgtcgccccgacattgcg
cgcgcccagctgctgctggcggccagcgacagcaatcttgcggcgcagcgcgcggccttt
ttgccgcaggtgagcctgagtgcgaacttcggcagcctgttcatcaacgcgctggattac
aacccggcccgggtctggtctctgggcggcagcattctggcgccgctgttcaatggcggt
cgcctgcagggccagttcgatgcggcatctgcgcagcgcgatcaggctgcctacgcctat
cgcggtgtggtcatcaaggcctttggcgacgtggaaacagctctggtcagttcccagcaa
ctgcaagcccagtgggagcatgccaaggaacgcgaaaaagtgctgggtcgtacgctgggc
tttgccaaggatcgctatgaggccggctatgccagctatctggaggagctggatgcccaa
cgcaatctgtttgccgtgcagcaggaagtgctgcgcctgcgccagagccagctcgaaaac
gccgtggcgctgtaccaggcgctgggtggcggctggcaactggcggatacgaccgccccg
caatcttga
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