Campylobacter upsaliensis: CUP3940_0606
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Entry
CUP3940_0606 CDS
T06758
Symbol
cmeD
Name
(GenBank) multidrug efflux system CmeDEF, outer membrane component CmeD
KO
K12340
outer membrane protein
Organism
cux
Campylobacter upsaliensis
Pathway
cux01501
beta-Lactam resistance
cux01503
Cationic antimicrobial peptide (CAMP) resistance
cux02020
Two-component system
cux03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cux00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CUP3940_0606 (cmeD)
09132 Signal transduction
02020 Two-component system
CUP3940_0606 (cmeD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CUP3940_0606 (cmeD)
01503 Cationic antimicrobial peptide (CAMP) resistance
CUP3940_0606 (cmeD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cux02000
]
CUP3940_0606 (cmeD)
02044 Secretion system [BR:
cux02044
]
CUP3940_0606 (cmeD)
01504 Antimicrobial resistance genes [BR:
cux01504
]
CUP3940_0606 (cmeD)
Transporters [BR:
cux02000
]
Other transporters
Pores ion channels [TC:
1
]
CUP3940_0606 (cmeD)
Secretion system [BR:
cux02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
CUP3940_0606 (cmeD)
RTX toxin transporter
CUP3940_0606 (cmeD)
Multiple protein transporter
CUP3940_0606 (cmeD)
RaxAB-RaxC type I secretion system protein
CUP3940_0606 (cmeD)
Antimicrobial resistance genes [BR:
cux01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
CUP3940_0606 (cmeD)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
CUP3940_0606 (cmeD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Cob_adeno_trans
Motif
Other DBs
NCBI-ProteinID:
QKF87574
LinkDB
All DBs
Position
complement(607045..608310)
Genome browser
AA seq
421 aa
AA seq
DB search
MKKINKCLILILTPLILKASNLNELVELSLRNESYLIKELQTLQSVAQKDAAFRAYLPNL
SLSSGYIANNKDRALTEPNESLFSRLSLNFLLYDGGKREAHIKSLKLQEILARLDEKEQK
NLLALNAATLYFNYLSLEELIKAGEQKKTFLKQSLTRLESFYNAGLSAKDELESIRAKFH
LASLELSQRILKLENIKKELFILTARTFTPQGKAKLKEPQKTQSQNAKVLKAREQIDLAN
EGVKAARAEFFPKFFVQNHLSFYDNHHNPKLPAPYQNLASAMFSESGTANQIMLGLEWKI
FDFGTRNKELESKRLALQIQRANYELLKRQNEEELSYLKKNLAVLKEQIEALKYSLNAAN
LAFESVNKKYSAGLCSYVEYLQALELKFKAMSDLELAKNEFEITKANYYFTAGFDLSKEI
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaattaataaatgcctaatcttaatcttaacaccgcttatacttaaagcttcc
aatttaaatgagcttgtagaacttagtctgcgtaatgaaagctacctcattaaagagctt
caaacgctgcaaagtgtagcgcaaaaagatgcggcttttagggcgtatctgccaaattta
agccttagttctggttacatagcaaataacaaagatcgcgcacttacagagccaaatgaa
agccttttttcaagacttagcttaaatttcttactgtatgacggaggcaagagagaagca
catatcaaaagcttaaaactgcaagaaattctagcaaggcttgatgaaaaagagcaaaaa
aacctccttgctttaaatgcggctacgctttattttaactaccttagtcttgaagaatta
atcaaagctggagagcaaaaaaagacctttttaaagcaaagcttaacaagacttgaaagc
ttttataatgctggacttagtgctaaagatgaattagaaagcattagagcgaagtttcac
ttggcttctttagagctttctcaaagaattttaaagctagaaaatatcaaaaaagagctt
ttcatccttacagcaagaactttcactccacaaggaaaagcaaagctaaaagagcctcaa
aaaacgcaaagtcaaaacgctaaagttttaaaggctagagaacaaattgacttagcaaac
gagggagtaaaggctgctagggcggagtttttccctaaatttttcgtgcaaaatcatttg
agtttttatgataatcatcacaatccaaaactccccgccccctatcaaaacttagcctca
gcaatgtttagcgaaagcggaacggcaaatcaaattatgctaggcttggagtggaaaatt
tttgattttggcacgagaaataaagagttggaaagcaagcgtttggctttgcaaattcaa
agagcaaattatgagttgcttaaaagacaaaatgaagaagaattaagctatttaaagaaa
aatttagccgtcttaaaagagcaaattgaggcattaaaatacagtctaaacgcagcgaat
ttggcttttgaaagtgtcaataaaaaatatagtgctggactttgctcttatgtagaatat
ttacaagccttagagcttaaatttaaagcaatgagtgatttagaacttgctaaaaatgag
tttgaaatcactaaggcaaattattattttaccgcaggatttgacttaagtaaggaaata
caatga
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