Cyprinodon variegatus (sheepshead minnow): 107091021
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Entry
107091021 CDS
T06110
Symbol
lct
Name
(RefSeq) lactase-phlorizin hydrolase
KO
K01229
lactase-phlorizin hydrolase [EC:
3.2.1.108
3.2.1.62
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00052
Galactose metabolism
cvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
107091021 (lct)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cvg03110
]
107091021 (lct)
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.62 glycosylceramidase
107091021 (lct)
3.2.1.108 lactase
107091021 (lct)
Chaperones and folding catalysts [BR:
cvg03110
]
Intramolecular chaperones
Others
107091021 (lct)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_1
Cellulase
Motif
Other DBs
NCBI-GeneID:
107091021
NCBI-ProteinID:
XP_015240203
LinkDB
All DBs
Position
Unknown
AA seq
1753 aa
AA seq
DB search
MSRLLWLVCLYLLFVIGGWSSEVKSEDDFMLLAGPLTEKQISASSGEENVVFDCSHPIPA
VSKQYFEYLKTRGVTHFKVPLSWTKLLPNGLASKPQQAVVRCYQTLLKQLLEEDLQPVVI
LHGSSVPDSLRSRYGGWESQKLLQMFQHYAEFALKEFGPLAHSWVTVSDLEEVFFEGQSA
DDHSLLQNFIQLNKKIHQFYHQNFPDKTFPPDFQWATSSESFKVEGGWLEGGKGETIWDR
FGHEGQAYENQTADLACDSYNKVDVDVFLLRGLGVNTYQFSISWARVFPSGYRASVSNEG
VLYYNNLINALVESGIRPVATLYHWDLPQAMQDEGGWTTDFIVEAFKDYADFCFSRFGDR
VKDWNTFSSPWVVSHAGYGTGEHAPGVKDYVTASYQVTHNILKSHAEAWHVYNDKYRGTQ
GGKVGIALNSDWARPGDPMKPEDVAAAERYLEFMLGWFAHPIFIDGDYSQVLKTQIEKKR
SDCAGSVPAVLPTFTAAEKARIKGTSDFFGLNHYTSRLVSSSVGGCVPGPQGVGDFLAYV
DPSWPTTASDWIVSLPSGLRSLLTYIKNQYLTSHNVPIYITGNGMPTEYSGDPLNDTSRI
DYFSGYINEALKAITEDGVDVQRFTVQSLMDGFEGKQGYSERFGLLHVNFEDSYRPRSPK
QSAYFYAQIIEQNGFVAREQPNFEGLKIPQAYRSTPLPPSEVPSTSKIVWEKFTPQKKFD
RQMYHYGTFPENFYWGVSSSAYQIEGGWNVDGKGPSVWDTFTQKPGSGIPDNANGNKACD
SYDRLDEDLYMLRAMNVKSYRLSLSWSRIFPTGRRASVNQKGVDYYNRLIDGLLALKITP
MVTIYHWDLPQALQDEGGWENEEMINIFNDYCDFCFTTFGDRVKFWMTMNDPQGIAWLGY
GSGTIPPNIVKPGTAPYQVAHNLIKAHALAYHTYDEKHRSSQKGVVSIALNAEWVEPIDI
TVPREIAAADRAMQFQLGWFAHPIFKNGDYPEAMKAQVLVKSELQGLSESRLPSFTEEEK
SFIKGTADMFCVNHYTTRIVTHITGPITPDSYENDWDFTKEEVKDSKPTDIKNQRAVSWG
LRRVLNWIKEEYGNPEIYITENGVATKSKTAWNDYDRVYFYKTYINEAFKANELDGVRVK
GYTAASLMDSFEWLNGNTVGFGLYHVDFTNENRPRTPKFSAHFYFQVMKNNGFPMPDDEK
MLFGEFPQPFLWSTATASYQIEGGWRADGKGLSIWDKFAHTPLRVFDDDNGDIACDSYNK
IDEDITILKQLRVNHYRFSISWARILPDGTTNYINEAGFSYYDRLVNALLNANIKPHITL
YHWDLPQALQNAGGWENDTIVERFRDYADIIFSRLGDRVKLWITINEPYNIAMVGHGYGV
AAPGISFRPGTLPYIVGHNLIKAHAEVWHLYNDKYRATQNGKISITINSDWSEPRNPYKQ
EDIDAARRVIQFYIGWFAHPIFNGDYSEMMKTIIRERSLAAGLAKSRLPEFTPEEIKRIK
GTHDYFGFNHYTTVMAFPVEYGNLQHYDADRGAGTLSDHSWLDSGSGWLKVTPFGMRRIL
NFIKEEYGNPTIIITENGVSEKGEVDLKDSHRSYFYEKYINQVLKAYLLDKVDIRGYTAW
TLMDNLEWATGFSERFGLFYVNRSDPNLPRVAKESVSSYATIINCNGFPDPALGPHDCLK
PGQEATSAPLNDSSVNFLGMKLSADEAETGLNATFALLIIASIVAICLTIGFFLTKRSFK
KKNVDNIELERKF
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggttgctgtggcttgtgtgtctctatcttttatttgtgattggtggatggagc
agtgaggtgaagagtgaagacgactttatgcttcttgctggccctctgactgagaagcag
ataagcgcatccagtggtgaggaaaatgttgtatttgactgcagtcatcccataccagct
gtttctaaacaatattttgagtacctcaagaccagaggagtgacacacttcaaagttcct
ctctcatggaccaaacttttgccaaatggccttgcaagcaagcctcaacaggctgtggta
agatgttaccagaccctgctaaagcaactactggaggaagacttgcaacccgtcgtcatt
cttcatggatcatcagttccagattctttgaggtccaggtatggaggttgggaaagtcag
aagctgttacagatgtttcagcactatgcagagtttgccttgaaagagtttggtccactg
gcccattcatgggtgacagttagtgacctggaggaggtattttttgaaggccagtctgca
gatgatcatagtcttctgcaaaacttcattcagctcaacaagaagattcaccagttttac
catcagaacttccctgataagacatttcctccagactttcaatgggccacatcatcagaa
tctttcaaagttgaaggaggctggttagaaggggggaaaggagagaccatctgggatcgt
tttggtcatgaaggccaagcatatgaaaatcagactgctgacctcgcttgtgacagttac
aacaaggtcgatgtagatgtcttcctcctgcgaggccttggagtcaacacctaccaattt
tctatctcctgggcccgtgtttttccctctggttatagagccagcgtgtcaaatgaaggg
gttctctactataacaatttgatcaacgctcttgtggagtctggcattcggcctgttgcc
actctctaccattgggatcttcctcaagctatgcaagacgagggtggatggaccacagat
ttcattgttgaagcttttaaggactatgctgacttctgcttcagccgatttggagacagg
gtcaaggactggaacacattcagcagcccctgggtggtcagccatgcagggtatggcact
ggtgagcatgctcctggagttaaagactatgttactgcctcttatcaggttactcataat
atactaaaatcccatgcagaagcctggcatgtctacaatgataaatacagaggaacacag
ggagggaaagtgggcattgcattaaactcagactgggctcgaccaggtgaccccatgaaa
cctgaagacgttgcagctgcagagcgctaccttgagtttatgctaggctggtttgcccat
cccatattcatagatggggattattctcaagttcttaaaactcagattgaaaagaaaaga
agtgattgtgctggatctgtgccagctgtacttccaacttttactgctgcagagaaggcg
aggataaagggaacctctgattttttcggtttaaaccactacacttcacgtttggttagc
agcagcgtaggtggatgcgtccctggtcctcagggagttggagacttcctggcatacgta
gacccctcatggcccactacagcatctgactggatcgtctcattgccatcaggattacga
tcacttttaacatacattaaaaatcaatatctgacatctcataatgtgcccatttacata
actgggaatggcatgccaacagaatacagtggagaccccctcaatgacaccagtagaata
gattactttagtggttacatcaatgaagccctaaaagcaattacagaagatggagtggat
gtacagcgattcacagtgcaatcgctcatggatggatttgagggaaaacaagggtacagt
gaaagatttggacttctccatgttaactttgaagatagttacaggccgagatcaccaaaa
caatcagcatacttctatgctcagatcattgaacaaaatggttttgttgcacgtgaacaa
cctaattttgaaggcttgaaaataccacaagcctaccgttctactccactgcctccttca
gaagttccatcgacatcaaagattgtctgggaaaaatttacaccacagaaaaaatttgat
agacaaatgtatcactatggcactttcccagaaaacttttactggggtgtttcgtcttct
gcataccaaattgagggtggatggaatgttgatggcaaaggccctagtgtatgggataca
tttactcaaaagccaggtagtggtattcctgacaatgcaaatggtaacaaagcatgtgac
agttatgacagacttgatgaagacctatacatgctgcgagctatgaatgtaaaatcatac
agactttctttgtcatggtccagaatctttcccactggtaggcgtgcatccgtgaaccag
aagggtgttgactattataacagacttattgatggcctcttggctcttaaaattacccca
atggtcacaatttatcactgggacctcccacaagctttacaagatgagggtggatgggag
aacgaggagatgattaatatctttaatgattattgtgacttttgcttcaccacctttggt
gatagagtgaaattctggatgacaatgaatgatcctcaagggattgcatggctaggatat
ggttctggaacaatccccccaaacattgtgaagccaggaacagcaccataccaagttgca
cacaacctgataaaagctcatgccttggcataccacacatacgatgaaaaacaccgttct
tcacaaaagggagtagtatcaattgccctcaatgcagaatgggttgaacctatagatatc
actgtccctcgtgaaattgctgctgctgaccgggcaatgcagttccagttgggctggttt
gcccacccaattttcaaaaatggtgactatccagaagccatgaaagcccaagttttagtg
aaaagcgaactccagggtctgtcagagtcaagacttccttctttcacagaggaggagaag
agctttattaaaggaactgcagacatgttttgtgttaatcactacaccaccagaatagtt
acccatattacaggtccaattaccccagactcctatgaaaatgactgggactttacaaaa
gaagaggtaaaagattcaaaacctacagacataaaaaaccaaagagctgtatcttggggt
ttaagaagagtcctcaactggatcaaagaagagtatggaaacccagagatatacataact
gagaatggtgtcgctacaaagtcaaaaactgcatggaatgattatgatagagtgtatttt
tacaagacatatatcaacgaggcttttaaagccaatgaacttgatggagtaagggtaaaa
ggttacacagcagcctccctcatggactcttttgagtggttaaatggcaatacagttggt
tttgggctctaccatgtggacttcactaatgaaaatagaccaagaacacccaagttttca
gctcatttctacttccaagtcatgaaaaacaatggtttccccatgccagatgatgagaaa
atgttgttcggagaattcccccaaccctttctctggagtactgcgactgcgtcttaccag
attgaggggggttggagagctgatggaaaaggactcagtatttgggataagtttgcccac
actcctctcagagtttttgatgatgacaatggagacatcgcatgtgacagttacaataaa
atagatgaagacattacaatactgaagcaacttagggtaaaccattatcggttctccata
tcttgggcacggatacttcctgatggcactacaaattatattaatgaggctggatttagc
tactatgacagactggtgaatgcactacttaatgcaaacatcaaacctcatattactttg
taccactgggatcttccacaagccctgcagaacgctggaggctgggaaaatgatacaatt
gttgaaagatttagggattatgctgacattatcttcagtcgtcttggtgacagggtgaaa
ctttggattaccatcaatgagccatataatatagcaatggttggccatggatatggagta
gctgccccaggtataagtttccgtcctggtactcttccttacattgttggtcacaatctt
atcaaagctcatgccgaagtgtggcatctatacaatgacaaatatcgggctacacaaaat
ggaaagatatccattactattaactctgactggtcagagccaaggaacccctataaacaa
gaggatattgatgctgcaaggcgtgtaatacagttctatattggctggtttgcccatccc
atatttaatggtgactacagtgaaatgatgaagacaatcattcgggaacgcagtcttgct
gctggcttggctaaatcacggttgcctgagtttacaccagaagaaataaaaagaattaag
gggacacatgactattttggatttaaccattacaccactgtcatggcattccctgtagag
tatggaaaccttcaacattatgatgcagacaggggtgcaggcacactttctgatcatagt
tggctagactctggttctggctggctgaaggtcacaccatttggaatgcgcagaatattg
aattttattaaggaggaatacggaaatcctaccattattatcactgagaatggtgtctca
gaaaagggggaggtggatcttaaagattctcacaggagttacttctatgaaaaatatatc
aaccaagtattgaaagcttatctacttgataaggtggacattcggggctacacagcttgg
acactcatggataacctggaatgggccactggcttctcagagagatttggacttttttat
gtaaatcgttctgatcccaatctgcctcgagtagcaaaagaatctgtgtcttcctacgcc
accatcattaactgcaacgggtttcccgaccctgcattaggacctcatgactgtctgaag
cctggacaagaagcaacaagtgctccattaaatgacagttctgtgaacttcctgggcatg
aagctctctgctgatgaagctgaaactggacttaatgctacatttgctttgctcatcatt
gcatcaatagtggccatttgtttgaccattggcttctttttgaccaaaagaagttttaaa
aaaaagaatgttgacaatatagagttggagaggaaattctaa
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integrated database retrieval system
