Desulfocurvibacter africanus subsp. africanus: Desaf_2011
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Entry
Desaf_2011 CDS
T01662
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
daf
Desulfocurvibacter africanus subsp. africanus
Pathway
daf01501
beta-Lactam resistance
daf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
daf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Desaf_2011
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Desaf_2011
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
daf02000
]
Desaf_2011
01504 Antimicrobial resistance genes [BR:
daf01504
]
Desaf_2011
Transporters [BR:
daf02000
]
Other transporters
Pores ion channels [TC:
1
]
Desaf_2011
Antimicrobial resistance genes [BR:
daf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Desaf_2011
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Desaf_2011
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Desaf_2011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
EGJ50340
UniProt:
F3Z396
LinkDB
All DBs
Position
2243670..2245172
Genome browser
AA seq
500 aa
AA seq
DB search
MNRCIQAARMTTELPAQAWGRAASSLSLTCQRRARHSARKIFWAILMALLLGGCGPLLKT
PYSAPEVSMPQGWSAASAPTAESLSTSLAGWSSGFGDPVLDRLVEQALLRNNDLAAATIR
VRRAQLQAGLAADQMIPALGATASTSHEKDIRHGGGTARAYALNGSVSYEADLWGKLSSQ
YDAAKWEALATEQDRQSTALSLVGTTMNLYWRIAYLNVRIDLSGQSIAYAEKTLALVRAQ
YRSGAASSLQVSEAEQSLASQQADQLDLLQQRVEAYNALALLFDGPPGDIVANPQVMPEG
ELPPVDAGLPAELLGRRPDLQAAELRLRKLLADTDATRASFYPSLTLTGTLGSSSTSLSE
VLRNPIAALATQLALPFLQWNEMRLSVKSSQAEYEEAVVNLRQTLYQALGEVENALSARR
MLAEQGASLERALAAARQVERMYEVRYRAGYVSLNVWLDAQETRRTSEIALAENLLNRLA
NHVTLLQALGGEAALPSQPL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaatagatgcatacaggccgcccgtatgaccacggaattgcctgcgcaagcgtgggga
agggcagcatcctccctgagtctcacttgccagagacgagcgcgccactcggctcgaaaa
atcttttgggcgatcctcatggccttgctgcttggaggctgcgggccgctgctgaagacg
ccctattccgcgccggaagtcagcatgccgcaaggctggagcgcagcctcggcccccacg
gccgagtccctgtccacgtctctggcgggctggtcgagcggctttggcgacccggtgctg
gacaggctggtggaacaggccctgctgcgcaacaacgacctcgccgcggccaccatcagg
gtgcgccgggcgcagttgcaggccggcctggcggcggaccagatgatacccgccctcggc
gcgaccgcgagcacgagccatgaaaaggacatacgccatggcgggggtaccgcgcgcgcc
tacgcgttgaacgggtcggtcagctacgaggccgacctgtggggaaagctttccagtcag
tatgatgcagccaagtgggaggccttggccacggagcaggaccgacagagcacggccttg
tccctggtgggcaccaccatgaacctgtactggcggatagcctacctgaacgtgcgcatc
gacttgagtgggcagagcatcgcctatgccgagaagaccttggctctggtgcgcgcgcag
taccgctccggagcggcgtcatccctccaggtatccgaggcggagcagagcctggccagc
cagcaggcagaccaattggacctactgcagcagcgggtggaggcgtacaacgccctggcg
ctgttgttcgacggtcctccgggcgacatcgtggccaacccgcaagtcatgcccgaaggg
gagctcccgcccgtggatgcgggactgccggcggagcttctgggccggcgtccggacctg
caggcagcagagttgcgtctgcgcaagcttttggccgataccgacgccacacgggccagt
ttctacccgtccctcacgctgacgggcaccctcggcagctcgagcacgtccttgagcgag
gtcctgcggaatcccatcgcggctctggcgacgcaattggcgttgccttttctgcagtgg
aacgagatgcggcttagcgtcaaaagttcccaggccgaatacgaagaggccgtcgtgaac
ctccggcagacgctgtaccaggccctgggcgaagtggaaaacgccctgtcggcaagacgt
atgctcgccgagcagggcgcaagtcttgaacgggctctggcggccgcccgccaggtcgaa
cgcatgtacgaggtccgctacagggccggctacgtttccctcaatgtctggcttgatgcc
caggaaacacgcaggacatccgaaatcgctctcgcggagaacctcctgaaccggctggcc
aaccacgtcaccctgcttcaggcgcttgggggcgaggctgccttgccaagccagccctta
tga
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