Dickeya parazeae: Dd586_2708
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Entry
Dd586_2708 CDS
T01138
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
ddc
Dickeya parazeae
Pathway
ddc01501
beta-Lactam resistance
ddc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dd586_2708
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Dd586_2708
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ddc02000
]
Dd586_2708
01504 Antimicrobial resistance genes [BR:
ddc01504
]
Dd586_2708
Transporters [BR:
ddc02000
]
Other transporters
Pores ion channels [TC:
1
]
Dd586_2708
Antimicrobial resistance genes [BR:
ddc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Dd586_2708
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Dd586_2708
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Dd586_2708
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Ribonuc_red_lgN
Motif
Other DBs
NCBI-ProteinID:
ACZ77548
UniProt:
D2BS01
LinkDB
All DBs
Position
complement(3049682..3051079)
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AA seq
465 aa
AA seq
DB search
MRVIMMVLGGSLLLSGCSLDPHYQRPSAPVPAAWPQGASYPATAQAPQPAEDIPWREVVV
DDKLRQVVEMALSDNRDLRKAIADVEAARAQLGEQRATLLPTINAGMNGDRSRSLISGSD
STVLSSSYGASLSTSAFTLDLFGKNRSLTGAAREAYLSSAATATSTRLTLIADTATAWVA
LATARSNLALARQTMESAGQSLAVTRSRLRNGVVSAVDVAQAETVYQQARADVASALTTE
AQDKNALDLLAGRSVPEALLPTDVASLSQAVKPVAAGISSAVLLRRPDVQAAEHTLKSAN
ANIGAARAAFFPSITLTASNGLSSEALSSLFSGGAHVWSLAPSVSLPLFDGGSNLSALRY
AEAEKQGYVASYEKTVQTAFREVADALARKGTIDEQQAAQRDYVTAAERSYQLASNRYQA
GVDTYLNVLDAQRTLYSARQSLFSLEQSRLDNLITLYNVLGGGGK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttatcatgatggtattgggcggcagcctgctgttatccggttgttcactggat
ccgcactatcaacggccctccgcaccggtgcctgccgcctggccgcaaggcgcatcctat
ccggcgacagcgcaggcaccccaacccgcagaggatattccctggcgagaggtggtggtg
gatgacaaattgcgccaggtggtggagatggcgttatcggataaccgggatttgcgtaaa
gcgattgccgatgtggaggcggcacgggcgcagcttggcgaacaacgggcaacattgttg
ccgacgattaacgccggtatgaacggtgatcgcagccggtcactcatcagtggcagtgac
agcaccgtgctaagcagcagttatggtgccagcttatctaccagcgcgtttacgcttgat
ctgtttgggaaaaaccgcagcctgacgggtgcggcgcgggaagcgtatttgtccagtgcc
gcgaccgccaccagtacccgcctgacgctgattgccgatacggcgacagcctgggtggcg
ctggcaacggcccgcagcaatctggcgctggcacgacagacgatggagagtgccgggcaa
tcgctggcggtaacccgcagccgattgcgtaatggtgtggtatcggcagtggatgtggcg
caagcagaaaccgtctatcaacaggcacgggccgatgtcgccagcgcgctaaccaccgaa
gcgcaggataaaaatgcgctcgatttgttagccggacggtcggtgccagaggcgttattg
ccaacggatgtggcgtcgctgtcgcaggcggtgaaaccggtcgccgccggtatttcgtct
gccgtgttgttgcgccgcccggatgtacaggccgcagaacatacgctgaaatcggccaat
gccaatatcggcgcggcgcgtgcggcgtttttccccagtattaccctgaccgccagcaac
ggtttgagtagcgaggcgttgtcatcgttgttcagtggtggcgctcacgtgtggtcgctg
gcgccttccgtcagtctgcctctctttgacggggggtccaatctgtcggcgttacgctat
gccgaagcagaaaagcagggttatgtcgccagttacgagaaaacggtgcagaccgcattt
cgcgaagtggccgatgcgctggcgcgtaaaggcacgattgatgagcagcaggcggcacag
cgagattacgtgacagcggccgaacgtagctatcaattggccagcaaccgctaccaggct
ggggtagatacctacctcaatgtgctggatgcccagcgtaccttgtacagtgcccgtcag
tcgttattcagcctggagcagtcgcggctggataatctgatcacgctgtataatgtgttg
ggcggcgggggaaaatag
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