Desulfovibrio sp. 86: DESU86_1965
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Entry
DESU86_1965 CDS
T11413
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
delf Desulfovibrio sp. 86
Pathway
delf01501
beta-Lactam resistance
delf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
delf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DESU86_1965
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DESU86_1965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
delf02000
]
DESU86_1965
01504 Antimicrobial resistance genes [BR:
delf01504
]
DESU86_1965
Transporters [BR:
delf02000
]
Other transporters
Pores ion channels [TC:
1
]
DESU86_1965
Antimicrobial resistance genes [BR:
delf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DESU86_1965
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DESU86_1965
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DESU86_1965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
VZH34081
LinkDB
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Position
DESU86:2021851..2023461
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AA seq
536 aa
AA seq
DB search
MSSISTAGRMNPAGAIVALLAVLALSACSFAPRYERPEMDMPSQWQKVDMGAAPLNTDWW
TRFNDPVLTSMVDEALKNNQDLAESLAKIDSAASQVGVATADLLPAVSGSAGSVAAGASE
KTPNTTPFNRSGLDRTTTTNQAALNASWELDLWGKYRNNYTMLSDVLMSTVIGHEALRLS
VAGQTAQGYFALLALDMQLDTARRTLKTREDAFSIYTSRYKQGDITELDWQRARAEVETA
RAQVHTSTVAVDKAEAGLAVLLGRSPRDIMERGMPRGQAIGMLPSPPVLPEGLPSDLLQR
RPDVRASEFTMMAYNANIGVARAQFFPSISLTGMLGTVSSAVGSLFTGPAGAWSYGVTGS
MPLLDFGRTWYNVKDAEARKKASIAVYRKTVQTAFQDMRTALTTQREADAIVRSMQIQVE
SLRRATTIARLQYDNGYTDYLTVLDAERQLFAAELQLASALRDRLDSVVSVCMALGGGWN
DPGASPSFPVVSTEKLLDQETSTGALGKAPVSGKAAPKPVKTQPATQDQSKGGVSL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgagttccatcagtactgccggacgcatgaacccggccggggccattgtcgccctgctg
gccgtgcttgcgctttcggcctgctcatttgcgccgcgctatgagcgccccgaaatggac
atgccgagccagtggcaaaaggttgatatgggggcagcccccctgaacaccgactggtgg
acccgtttcaatgaccccgtgcttacctccatggtggacgaggcgctgaagaataaccag
gacctggccgaatctctcgccaagatagattccgccgcgtcacaggttggcgtggccacc
gctgatctgctgcccgccgtgagtggttcggccggttccgtggccgcgggcgcttctgaa
aagacgcccaacaccacgccgttcaacaggagcggccttgaccgcaccacgaccaccaac
caggctgcgctcaacgcctcctgggaactggacctctggggcaaataccgcaacaactac
accatgctcagtgacgtgctcatgagcacggtcatcgggcacgaggccctgcgcctttcg
gtggcggggcagaccgcccagggctattttgccctgctggctctggacatgcagcttgat
acggcccgccgtaccctcaagacccgcgaagatgcgttcagcatctacacgagccgctac
aagcagggcgacatcaccgagcttgactggcagcgcgccagggccgaggtggaaaccgcc
cgcgcccaggtgcacaccagcaccgtggctgtagacaaggccgaagccggtctggccgtt
ctgctgggccgttcgccccgcgacattatggaacgcggcatgccgcgcggtcaggccatt
ggcatgctgccttcgccgcccgtgttgcccgaaggtctgccttctgacctgctgcaacgc
aggcctgacgtgcgcgcctccgaattcaccatgatggcgtacaatgccaatatcggcgtg
gcccgcgcccagttcttcccctccatctcgctgacgggcatgctgggtacggtcagttcg
gccgtaggcagcctgttcaccggccccgccggggcgtggagctacggcgtcaccggttcg
atgcccctgctggactttggccggacctggtataacgtcaaggacgcggaagcccgcaaa
aaagcctccattgccgtgtaccgcaagaccgttcagacggcgttccaggatatgcgcaca
gccctgacgacccagcgcgaggctgacgccattgtacgcagcatgcagattcaggtggaa
agcctgcggcgtgccaccaccatcgcgcgtctgcaatacgataacggctacacggactat
ctcaccgtgctggatgccgaacggcagcttttcgccgccgaactgcaactggcttcggct
ctgcgtgatcgtctggacagcgttgtcagcgtgtgcatggcccttggcggcggctggaac
gatcccggcgcaagccccagcttccccgtggtcagcaccgaaaaactgcttgatcaggaa
accagcacaggcgcgctgggcaaggctccggtttccggcaaggccgcacccaaacctgtc
aaaactcagcctgcaacacaggatcagtccaagggcggcgtaagcctttaa
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