Devosia sp. H5989: XM25_06055
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Entry
XM25_06055 CDS
T04003
Symbol
LapE
Name
(GenBank) Type I secretion system, outer membrane component LapE
KO
K12340
outer membrane protein
Organism
deq
Devosia sp. H5989
Pathway
deq01501
beta-Lactam resistance
deq01503
Cationic antimicrobial peptide (CAMP) resistance
deq02020
Two-component system
deq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
XM25_06055 (LapE)
09132 Signal transduction
02020 Two-component system
XM25_06055 (LapE)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
XM25_06055 (LapE)
01503 Cationic antimicrobial peptide (CAMP) resistance
XM25_06055 (LapE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
deq02000
]
XM25_06055 (LapE)
02044 Secretion system [BR:
deq02044
]
XM25_06055 (LapE)
01504 Antimicrobial resistance genes [BR:
deq01504
]
XM25_06055 (LapE)
Transporters [BR:
deq02000
]
Other transporters
Pores ion channels [TC:
1
]
XM25_06055 (LapE)
Secretion system [BR:
deq02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
XM25_06055 (LapE)
RTX toxin transporter
XM25_06055 (LapE)
Multiple protein transporter
XM25_06055 (LapE)
RaxAB-RaxC type I secretion system protein
XM25_06055 (LapE)
Antimicrobial resistance genes [BR:
deq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
XM25_06055 (LapE)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
XM25_06055 (LapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
SPP1_Dit
LPD23
Motif
Other DBs
NCBI-ProteinID:
AKR55377
LinkDB
All DBs
Position
1270569..1271915
Genome browser
AA seq
448 aa
AA seq
DB search
MPIAIATPQLDAKHTYTLPELIDIAQLSNPVTRASWERARQAAIAVGVTEAAYLPVLSAN
VLAGVQQTSTTAPGIDGPLITVPPGTLTTTGAQVLPSLAVQWLLFDFGGRDAANAAAKDL
SYAANVTFNGAHQKLIFDVSSAFFSLSSARVQLSIARETLANTQTVLSAAEARLKTGVAT
TIEVAQAKQQVAQAQFGLTQSQGHERSAYLALLQAMGVSPTITIRVQDASGRRLPRAVPQ
DLNRLIEASLQRRPDVQAAFAKYRADQSGIAAARAEFLPKVALTGSVNRLAASLDVEDSR
FGQLAHLQSNQPNANLLVGISIPIFDGGLRDARLQAAMAQAAASEQDLAALQNAAAQQIV
VGYDLLRTSLAGYAAATELTNAAQTTYDAALDYYKNGLGTLADVSIAQTGLLQARLSKAT
AHSDSLIAAATIAFATGTLTNRMSSGAL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgccgattgccatcgcgacgccgcaactcgacgccaagcacacctacacgttgcccgaa
ctcatcgacatcgctcagttgagcaatccggtgacccgcgcgagctgggaacgcgcgcgc
caggcggccatagccgtcggcgtgacagaggcggcctacctgccggttctctccgccaat
gtccttgccggcgtccagcagacctcgaccaccgcgcccggcatcgacgggccgctcatc
accgttccccctggcacactgaccacgaccggcgcgcaggtgctgccgtccctggccgtc
caatggctgctcttcgactttggcgggcgcgacgccgccaacgcggcggcgaaggacctt
tcctacgctgccaacgtcaccttcaacggcgcccaccagaaactgatcttcgatgtcagc
agtgcctttttcagcctttcttcggcgcgcgtgcagctcagcatcgcgcgcgagacgctc
gccaacacccagaccgtgctgtcggcggccgaggcgcggctgaagaccggcgtcgcgacg
acgatcgaggtcgcacaggctaagcagcaggtggcgcaggcccagtttggcctcacccag
tcgcagggccatgagcgtagcgcctacctggcgctgctgcaggccatgggggtctcgccc
accattaccattcgggttcaggatgccagtggccgccgacttccgcgagccgtgccgcag
gatctcaaccggttgatcgaggcgtcgttgcagcgccggcccgatgttcaggccgccttc
gccaagtaccgcgccgaccagagcggcattgccgcagcccgtgccgagttcctccccaag
gtggccctgaccggcagcgtcaaccggctcgccgcttcgctcgatgtagaggacagccgc
ttcggtcagctcgcccatctccagagcaaccagcccaacgccaacctgcttgtgggcatc
tccattcccatcttcgatggtggcctgcgtgatgcgcggctgcaggcggccatggcgcag
gcggctgcttccgagcaggatcttgccgcgcttcagaacgctgctgcccagcagatcgtc
gtcggctatgacctgctacggacgagccttgcgggctatgccgcggcaaccgagctgacc
aacgcggcacaaaccacttatgacgcggcgctcgactactacaagaacggcctcgggact
ctcgccgacgtgagcatcgcccagaccggactgctgcaggcgcgcctctcgaaggcgacc
gcacacagcgattccctcatcgcggcagcgacgatcgcattcgctacaggtacgctgacg
aaccggatgtcgtccggcgccctctga
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