Dyadobacter fermentans: Dfer_4640
Help
Entry
Dfer_4640 CDS
T00970
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
dfe
Dyadobacter fermentans
Pathway
dfe01501
beta-Lactam resistance
dfe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dfer_4640
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Dfer_4640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfe02000
]
Dfer_4640
01504 Antimicrobial resistance genes [BR:
dfe01504
]
Dfer_4640
Transporters [BR:
dfe02000
]
Other transporters
Pores ion channels [TC:
1
]
Dfer_4640
Antimicrobial resistance genes [BR:
dfe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Dfer_4640
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Dfer_4640
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Dfer_4640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ACT95841
UniProt:
C6W3Z3
LinkDB
All DBs
Position
complement(5602344..5603789)
Genome browser
AA seq
481 aa
AA seq
DB search
MKRNFKHIYGLLFPAILITVSGCKLTQPVEQRAQIKTPETFAGQADSTGVASLQWKTFFN
DQHLVALIDTALQNNLDLKMAVQRIEMARTNIMIAHGAMLPSVTGDVSGGGRKFGDYTMD
GVGNYDTNFSSNLDDDRRLPAPFLPDYFLGLRSSWEIDIWGKLKNQKKAAYTRFLASEKG
RQAIVTGLIAEIARSYYELLALDTELDIIQKNIDLQESAVETIKIQKEAGRANELGVQQL
TAQLLNTRSLEYEVRQQVVEIENNVNLLAGRFPQPVTRSSAMGQAVPQSISAGVPAQMLR
RRPDIQQAQLELLANYSEQQAAQLALLPSLNITAFLGFNAFKSNLLFSSGSLAYSALGGL
TAPLINRKALKAGQKRAEAASLEALYAYNKSVLTGFSEVSTSLKKLENTREIGELKRQEV
EVLQQAVATSQDLFLTGYASYLEVITAQRGVLQEELNLTNVQKEQFLALVELYRALGGGW
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaatttcaagcatatatacggtttgctattccctgcaatcctgatcaccgta
tcgggttgtaaactgacgcaacccgtcgagcagcgcgcacagatcaaaacaccggaaacc
ttcgcggggcaggccgattccacgggcgttgcttcgctgcaatggaaaacgttcttcaac
gaccagcacctggtcgcgttgatcgacaccgctttgcagaacaacctcgacctcaaaatg
gccgtccagcgcattgaaatggccagaaccaacatcatgatcgcccacggcgcaatgcta
ccctccgtgaccggcgatgtgtcgggcggcggtcgcaagttcggggattacacgatggac
ggcgtaggtaactatgataccaacttctccagcaatctcgacgacgaccggcgtctcccc
gcccctttcctgcccgattacttcctggggttgagaagttcgtgggaaattgatatttgg
ggtaaactcaaaaaccagaagaaagctgcatacacgcgtttcctggcaagcgaaaaaggc
cgccaggcgatcgtaaccggcctgatagctgaaatcgcacgttcctactacgaattgctg
gcgctggacaccgaattggacatcattcagaagaacatcgacttgcaggaatcggcggta
gaaacgatcaaaatccagaaggaagccggccgcgccaacgaactcggcgtgcagcagctt
acggcacagttactcaacacgcgcagcctggaatacgaagtgcgccagcaggtggttgaa
atcgaaaacaatgtaaacctgctcgcaggccgtttcccgcagcctgttacgagaagcagc
gctatggggcaggccgttccacagtcgatcagcgctggtgtaccggcgcaaatgctgcgc
agaagaccagacatccagcaggcccagctggaactgctcgcgaactattccgaacagcaa
gccgctcagttggcgctgctcccgtcgctgaacattacggcttttctgggtttcaatgca
tttaaaagtaacctgctcttctcgtcgggatctctcgcgtacagcgccctcggcggcctc
accgccccgctgatcaaccggaaggcattaaaagccggacaaaaacgcgccgaagccgcc
agcctggaagcgctttacgcctataacaaatccgttctgactggtttcagcgaggtaagc
acgagcctgaaaaagctggaaaacacccgcgaaatcggcgagctcaaaagacaggaagtg
gaagtactccaacaagccgtcgccacgtcacaagacctgttcctgaccggctatgcttcc
tacctcgaagtaatcaccgcccaacgcggcgtgttgcaggaagagctgaacctcacgaat
gttcagaaggaacaatttctggcattggtcgagctgtaccgggctttgggaggtggctgg
gaataa
DBGET
integrated database retrieval system
