Dyadobacter fermentans: Dfer_5535
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Entry
Dfer_5535 CDS
T00970
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
dfe
Dyadobacter fermentans
Pathway
dfe01501
beta-Lactam resistance
dfe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dfer_5535
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Dfer_5535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfe02000
]
Dfer_5535
01504 Antimicrobial resistance genes [BR:
dfe01504
]
Dfer_5535
Transporters [BR:
dfe02000
]
Other transporters
Pores ion channels [TC:
1
]
Dfer_5535
Antimicrobial resistance genes [BR:
dfe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Dfer_5535
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Dfer_5535
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Dfer_5535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ACT96726
UniProt:
C6VVJ6
LinkDB
All DBs
Position
complement(6661854..6663236)
Genome browser
AA seq
460 aa
AA seq
DB search
MKNKFIGAVVLTILAASCQVTKPYQRPELTTQGLYRGESSQDTISVASISWKQFFPDTAL
TQLITRGLEQNPDLRIAMQHIVAAKASLQLSKSAFLPDLNGTLSVKQSKLAFPQGFGIIS
STTQYDLGLGSSWEADIWGKLRSAKRGALAGLLRTEEARKAIRTELIADIAGNYYTLLVL
DQQLAILEKTKKNRFADVKAVTMLKEANILNGAAISQSEANAYAAEIAIPALKNQIRETE
NALNLLLGQPSGAVTRTTLDQQKANIPLKTGVPSQLLQNRPDVKQAEYALWEAFENTNVA
KTFFYPALTITANGGFTSFNFQDWLTSLGLFGNVAAGLTQPIFNRGANKARLATAKARQE
QAAIELQKSMLIAGREVSDALYAYETAGEQREIRVKQLASLAKAVDANRKLLRFSSTTNY
TDVLTSEQNLLAAELDAVNDRHRQWLAVIRLYHALGGGTR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaatttatcggcgcggtcgtattaaccatcctggcagcttcctgccaggtg
accaagccttaccaacggcccgaattgaccacacagggactttaccggggcgaatcttcg
caggacacgatcagcgttgcaagcatttcgtggaaacagtttttccctgacaccgcattg
acccaactcattacacgaggcctcgaacagaaccccgacctgaggattgccatgcagcac
attgtagcggccaaagcatcccttcaattgagcaaatcggcctttctgccagacctgaac
ggtacattgtcggtgaaacagtccaagcttgcattcccgcagggcttcggcatcatcagc
tccaccacccagtacgacctgggcctgggctcttcgtgggaagcggatatctggggaaaa
ctccggagcgccaaacgcggtgcgctcgcaggcctgctgcggacagaagaagcacgaaag
gcgatccggacagaactgatcgccgacattgccggaaactactacacactgctcgtactg
gatcagcagctggcaatccttgaaaaaacgaagaaaaaccgcttcgctgacgtaaaagcg
gtaaccatgctgaaagaagcgaatatcctgaacggcgcggccatttcgcagagcgaagcc
aatgcctacgccgccgaaatcgcgataccggcattgaaaaaccagatccgcgaaacggaa
aatgcattgaacctgctgctgggccagccttccggcgcagtaacacggacaacgctcgac
cagcaaaaggccaacataccactgaaaaccggtgtgccgtcccaacttttacagaaccgg
ccggatgtgaagcaagcggaatacgcgctttgggaagcgtttgaaaataccaatgtggct
aaaacgttcttttatcccgccctgacgatcaccgctaacggcggatttaccagcttcaac
ttccaggactggctaacatcgctggggctcttcggaaacgtggccgcgggcctcacgcag
ccgatcttcaaccggggcgccaacaaggcccgcctcgccacggcaaaagcacggcaggag
caagcggcgatcgaacttcagaagtccatgctgatagcaggccgggaggtgtcggacgcc
ctgtatgcctacgaaaccgcaggcgagcagcgcgaaatacgggtaaaacaacttgcctca
ctcgcaaaggccgtcgatgccaatagaaagctgctccggttcagttccaccaccaactat
accgatgtgctgacgtcggaacaaaacctgctcgccgcggagctcgacgccgtgaacgat
cggcatcggcaatggctggccgtgatcaggctttaccatgcattgggaggcgggacgcgg
tag
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