Dyadobacter fanqingshengii: NFI81_12240
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Entry
NFI81_12240 CDS
T08895
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
dfq
Dyadobacter fanqingshengii
Pathway
dfq01501
beta-Lactam resistance
dfq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dfq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NFI81_12240
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NFI81_12240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfq02000
]
NFI81_12240
01504 Antimicrobial resistance genes [BR:
dfq01504
]
NFI81_12240
Transporters [BR:
dfq02000
]
Other transporters
Pores ion channels [TC:
1
]
NFI81_12240
Antimicrobial resistance genes [BR:
dfq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NFI81_12240
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
NFI81_12240
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
NFI81_12240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Yop-YscD_ppl_1st
Motif
Other DBs
NCBI-ProteinID:
USJ38526
LinkDB
All DBs
Position
complement(2946864..2948270)
Genome browser
AA seq
468 aa
AA seq
DB search
MKRSITTLLFLIVLVASSCRISRDTPKTTAVLPDHFHDQPDDTTSIADLPWDAFFIDTTL
QKLIGSAIEKNYDMQIALKNIEAAQLISAQVRHNYLPQASLQISANSARPSDNSLNGLSL
DKFLGTSHIEDYGAVLNLSWEADIWGKIRNQQKAALAGYLQSKEARNAVQTYIVSSVTKG
FYNLLMLDAQLSIARKNVTLNDSTLEMITLQFNAGQVSSLAVQQAQAQQQLATQLIPQFE
QAIHIQENALKILAGELPGRIDRYQAFDQLALPEKLSAGIPSQMISRRPDVKSRELELVT
ASANIGITKANMYPALRITASGGVNSFLASNWFNIPASLFGVIAGGVVQPVFQQKRLRTQ
YEVAQVEQRRAVAEFRKSVLDAIGETSDALVRIDKLKEQENIAQLRSQNLRQATQNARML
FQNGMATYLEVITAQGNVLQSELSLTSIKRDQFHAVTDLYTALGGGWK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaagcatcacaaccctcctgtttctgatcgtgctggtcgcaagcagctgcaga
atttccagggatacccctaaaaccaccgcagtcctgccagatcattttcacgaccaaccc
gacgatacgaccagcattgcggatcttccatgggatgcatttttcatcgatacaaccctt
caaaaactcattggcagcgccattgagaagaattatgatatgcagattgcgttaaaaaac
atcgaagccgcccagttgatttccgcgcaggtgcggcataactatctcccgcaggcaagc
ctgcagatcagtgctaacagcgcccggccctcggataacagcttgaatggtttaagcctc
gataaatttctggggacgagccacattgaagattacggtgcggtattgaacttgtcgtgg
gaggcggatatctggggcaaaatcagaaaccagcagaaggctgcgctggcgggttatctg
cagagcaaagaggcccggaatgcggtgcagacgtacattgtatcttcggtcaccaaagga
ttttataacctgctgatgctggatgcccaactgtcgatagcccgaaaaaacgtaacgcta
aatgatagtacactggaaatgatcactttgcaattcaatgcaggccaggtaagttcgctg
gcggttcagcaggcgcaggcacagcagcagctcgccacacagctgatcccacagtttgag
caggctatccatatccaggaaaatgctttgaaaatactcgcaggagaattgcctgggcgt
atcgaccggtaccaagcatttgatcaactggcgcttcccgaaaaactatcagccgggatt
ccgtcccaaatgatcagtcggcggcctgatgtaaaaagccgcgagctcgaactggttacc
gccagcgccaacattggcatcaccaaagcaaatatgtacccggcgctgagaattacggca
agtggtggcgttaactcctttttggcaagtaactggttcaatattcctgcgtcattgttc
ggtgtaattgcgggcggtgtggttcagccggtttttcagcaaaaaagactacgaacacaa
tatgaagtcgcgcaggtagagcagcggcgggctgtcgccgaattcagaaagtctgttttg
gatgccattggagaaacatccgacgcattggtcaggattgataagttaaaggagcaggaa
aacattgcgcagcttcggtcgcaaaaccttcggcaggccactcaaaatgcccggatgctt
tttcaaaacggtatggccacttatctcgaagtcattaccgcccagggcaatgtgcttcaa
agtgagctttcattgacaagcatcaaaagggaccaatttcacgccgttacagatttgtat
actgcgctcggcggtggctggaaataa
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