Desulfosarcina ovata subsp. sediminis: DSCO28_48860
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Entry
DSCO28_48860 CDS
T06286
Name
(GenBank) multidrug transporter
KO
K12340
outer membrane protein
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov01501
beta-Lactam resistance
dov01503
Cationic antimicrobial peptide (CAMP) resistance
dov02020
Two-component system
dov03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DSCO28_48860
09132 Signal transduction
02020 Two-component system
DSCO28_48860
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DSCO28_48860
01503 Cationic antimicrobial peptide (CAMP) resistance
DSCO28_48860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dov02000
]
DSCO28_48860
02044 Secretion system [BR:
dov02044
]
DSCO28_48860
01504 Antimicrobial resistance genes [BR:
dov01504
]
DSCO28_48860
Transporters [BR:
dov02000
]
Other transporters
Pores ion channels [TC:
1
]
DSCO28_48860
Secretion system [BR:
dov02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
DSCO28_48860
RTX toxin transporter
DSCO28_48860
Multiple protein transporter
DSCO28_48860
RaxAB-RaxC type I secretion system protein
DSCO28_48860
Antimicrobial resistance genes [BR:
dov01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
DSCO28_48860
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
DSCO28_48860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
BBO84320
UniProt:
A0A5K7ZVV1
LinkDB
All DBs
Position
complement(5556020..5557411)
Genome browser
AA seq
463 aa
AA seq
DB search
MKRYLLLTLFALFGWAVAIKSSAADWSAISILDLDTAVAVALRDNPGLEAAAARVAQAKA
QVDQARSTYWPRLDASATGARVDLSESTYRENLALARLFNPSASLTDPEEYYNAGLTASW
TLFDGFERKFSNTAARYAEKSSVAALDDARRLLASAVSQAFFSAQLALENIAIAKADEAF
NQRQLADAEVRQRVGTGALSDVLNFQVRKNQAKTNRINQEYQHTVSLFGLAALLGLPESR
LPAHVKLAPLSAETTDELSAPPLDDLIQIALDRRPDIQQLRWRISQADARIGIARAGHYP
SLVLSGSLDGERSGDANFRQDDIGNSVQLGLTYNLFAGGYTRAKIQEARQHRTELEKQLS
EQRLSTTADIRSSAALVTTAQTQVALQRENADLVRRTRDLVEKEYNAGQGSLVRLNEAQK
DLITAQSNLALALVGLRQAWVELNTRAGILHGWHAGANRNIRH
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgttatctgcttttgacccttttcgcattgttcggctgggccgttgccatcaaa
tccagcgccgccgattggtcggccatctccatcctggaccttgacaccgcggttgccgtg
gccttgcgtgacaaccccggcctggaggcggctgcggcccgcgtggcccaggccaaggcg
caggtggatcaggcccgctccacctattggccccgtctggacgccagcgccacaggtgcc
cgcgtggatctgtccgaaagcacctaccgggaaaacctggccctggcccggctgttcaac
ccctcggccagccttaccgaccccgaggaatattacaatgcggggctgaccgcatcctgg
accctgttcgacgggttcgaacgcaagttttccaataccgccgcccggtatgcagaaaag
tccagtgttgccgcccttgacgatgcgcgccgcctgctggcatctgccgtgtcccaggct
tttttctcggcccagctggcccttgaaaacatagccatcgccaaggccgacgaggccttc
aaccagcgtcagctggccgatgccgaagtgcgccagcgtgtcggcaccggtgcgctcagt
gatgtgctcaattttcaggtgcgtaaaaaccaggccaagaccaaccgtatcaaccaggag
taccagcatacagtttccctgttcggactggccgcattgctggggcttcccgaatcgcgc
ctgccggcccatgtaaaactggcgccactgtcggcggaaacgacagacgaactgtcagcg
ccccccttggacgacctcatccaaattgccctggaccgccgtccggatatccagcagctg
cgctggcgcatcagccaggccgacgcccggatcggtatcgcccgtgcgggccactacccg
tcgctggttctgtcgggcagcctggatggagaacggtccggtgatgccaacttccgccag
gacgacatcggcaatagtgttcaactgggcctaacctacaacctctttgccggcggctat
acccgcgcaaaaatccaagaggcccgtcagcacaggacggagctggaaaaacagctttcc
gagcagcggctctccaccaccgccgatatccgcagttccgcggcactggtgaccacggcc
cagacccaggttgccctacaacgggaaaatgcggatctggttcggcgtacccgcgacttg
gtggaaaaggaatacaacgccgggcaagggtccctggtgcgcctcaatgaagcccagaaa
gacctgatcacagcccagagcaatctggccctggccctggtcggcctgcgccaggcctgg
gtggagctgaacacccgcgccggtattttgcacggatggcatgccggagcgaaccgcaat
atccgccattga
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