Desulfosarcina ovata subsp. sediminis: DSCO28_52500
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Entry
DSCO28_52500 CDS
T06286
Name
(GenBank) transporter
KO
K12340
outer membrane protein
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov01501
beta-Lactam resistance
dov01503
Cationic antimicrobial peptide (CAMP) resistance
dov02020
Two-component system
dov03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DSCO28_52500
09132 Signal transduction
02020 Two-component system
DSCO28_52500
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DSCO28_52500
01503 Cationic antimicrobial peptide (CAMP) resistance
DSCO28_52500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dov02000
]
DSCO28_52500
02044 Secretion system [BR:
dov02044
]
DSCO28_52500
01504 Antimicrobial resistance genes [BR:
dov01504
]
DSCO28_52500
Transporters [BR:
dov02000
]
Other transporters
Pores ion channels [TC:
1
]
DSCO28_52500
Secretion system [BR:
dov02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
DSCO28_52500
RTX toxin transporter
DSCO28_52500
Multiple protein transporter
DSCO28_52500
RaxAB-RaxC type I secretion system protein
DSCO28_52500
Antimicrobial resistance genes [BR:
dov01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
DSCO28_52500
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
DSCO28_52500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
BBO84684
UniProt:
A0A5K7ZWY1
LinkDB
All DBs
Position
complement(5952215..5953678)
Genome browser
AA seq
487 aa
AA seq
DB search
MPRVSLLFLVSGLFLLSTVFGGCAPQDRYRYETIKSEYADFACNLARPATDDPSAPRCAI
NSQLGLKDVLEIAQANNPDLLMALARIERARAMLAKSAAPFYPQVNFYTEYIQGDAPSAY
LFKAIDQRKLPQATVDFNDPGWFENYESGASAGINLFNGGKDFLNRKIAETGVTISELDR
DGIKNRIMATAIATYYDVLAADQFTMVAKESLQTTRSQLEIMDVRFRSGGALKTDLLSLQ
VRMAESKERLLQSRNRHRLAQAALAEILGVEPDVPFSIAETRSYAIDIPGDPLSAVGYAL
LHRPELAGAREKLRQSKMALDAAKAGYLPTLDFMTRYYVDDPAMKYNANRDNWTAGLYLN
WKIFDGFATRSERAASLAQLQEAMAADRKTLLAVKFDVKKAYFNLDEAEERLRVASSNVQ
TAAETFRLVKRQYEGGAANITRYLEAELAHNQARIRETSAFFDREKARAQIARSVGLWTG
PGESKKE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgccgagagtttcactgctgttcctggttagcggtctctttctgttgagcaccgtgttt
ggcggatgtgcacctcaggatcgttatcgctacgagacgattaaaagtgagtacgccgat
tttgcctgcaacctggcccgaccggccacggatgatccgtccgccccccgttgcgccatc
aacagccagttgggtctgaaggatgtcctcgaaatcgcccaggccaacaacccggatctg
ctcatggccctggcgcgcatcgaacgggcccgggccatgctcgccaaatccgccgcccca
ttctatccgcaagtcaatttttacaccgaatacatccagggtgacgccccgtcggcttat
ctcttcaaagcgatcgaccagcgcaaactgccgcaagccactgtcgatttcaacgatccg
ggatggtttgagaattatgaaagcggtgccagcgcgggcatcaacctgttcaatgggggc
aaagattttctcaaccgtaaaatcgccgagaccggcgtgaccatctccgaactggatcgc
gacggcatcaaaaaccggatcatggccaccgccatcgccacctactacgacgtgctggcc
gccgaccaattcaccatggtggccaaggagtcgctgcagaccacccgctcccagttggaa
atcatggatgtccgcttccgctcgggcggcgccctgaaaaccgacctgctctcccttcag
gtgcgcatggccgaatccaaggagcggcttctgcaaagccgcaaccgccaccgtctggcc
caggccgccctggcggaaatcctgggtgtcgaaccggatgtgcccttcagcattgccgag
acccggtcctatgccatcgacattcccggggatccgctgtctgccgtgggctatgccctg
ctgcatcggccggaactggccggcgcgagggaaaaactgcgtcaatcgaaaatggcgctg
gacgcggcaaaagccggctacctgccgacccttgatttcatgacccgctactatgtggat
gatccggcaatgaagtacaacgccaatcgggacaactggaccgcgggcctctacctgaac
tggaaaatctttgacggctttgccacccgcagtgagcgggccgcatccctggcccagctt
caggaggccatggcggccgaccggaaaaccctgctggcagtcaaattcgacgttaaaaag
gcctatttcaatctcgacgaggccgaggaacgcctgcgggtggcctcgtccaacgtccaa
accgccgctgagacctttcggctggtcaaacgccagtatgaaggcggggccgccaacatc
acccgctacctggaagccgaactggctcacaatcaggcgcgcatccgtgaaaccagcgcc
tttttcgaccgcgaaaaagcccgcgcccagatcgcccggtccgtcggcctgtggaccggg
cccggtgaaagcaaaaaagagtaa
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