Danio rerio (zebrafish): 100003543
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Entry
100003543 CDS
T01004
Symbol
spdef
Name
(RefSeq) SAM pointed domain-containing Ets transcription factor
KO
K09442
SAM pointed domain-containing ETS transcription factor
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
100003543 (spdef)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
100003543 (spdef)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ets
SAM_PNT
SAM_3
Motif
Other DBs
NCBI-GeneID:
100003543
NCBI-ProteinID:
XP_001343077
Ensembl:
ENSDARG00000029930
UniProt:
F1QF97
LinkDB
All DBs
Position
6:complement(54274254..54309447)
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AA seq
325 aa
AA seq
DB search
MTSPVRIHSESAVLQPPHSTGFTESSLALLKREDGIVQSSEMLEHKASDRGLYLSCFDML
FTEDAAWLVRVTDAPAAAGARLEPEQCPVIDSPGLGASPLSPTLEEQVEERSLEQVQSLV
VGEVLKDIETACKLLNITPDPMEWNCGNVQKWLLWTEHLYRLPQVGKAFQDLDGKDLCSM
SEEDFRQRSPQCSETLHAHLDIWKSAAWMKERCSGGETRMREGEELWSEADSSCSGQPIH
LWQFLRELLLKPHSYGRCIRWLNKEKGIFKIEDSAHVARLWGLRKNRPAMNYDKLSRSIR
QYYKKGIIRKPDVSQRLVYQFVHPV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtccggttcgaattcattcagaaagtgctgttcttcagcctccgcactccaca
ggcttcactgaaagctcgctggctcttcttaaaagggaagatggcattgtgcaaagttca
gagatgctagaacacaaagcctccgaccgaggactttacctgtcctgctttgacatgctg
ttcactgaggatgctgcgtggctggtgagggttacggatgcgcctgcggccgctggagcc
agactggagcccgagcagtgccctgtgatcgacagccctgggctgggagcctcacctctg
tcacccaccctggaggaacaggtggaggagagatccttggagcaggtgcagagtctagtc
gtgggagaagttctgaaggacatcgaaacagcttgtaaacttctcaacatcacaccagac
cccatggagtggaattgtgggaacgttcagaagtggctgttgtggacggagcatctctac
aggcttccacaggtgggaaaagctttccaagacctggatgggaaagatttatgttccatg
agtgaggaagatttccgacagcgttcgccacaatgcagcgaaacactacatgcacatctg
gacatatggaaatcagctgcttggatgaaggaaagatgttcgggtggagagaccaggatg
agggagggtgaagagctgtggtcagaagcagattcatcttgttctggtcagccgattcac
ctgtggcagttcctcagagaactcctgctcaaacctcacagttacggacgctgcattcgc
tggctcaataaagagaaagggatcttcaaaattgaggattcagctcacgtggctcgtctt
tggggcttgaggaagaaccgtcctgctatgaactatgacaaactcagccgctcgattcgg
cagtactataaaaagggcatcatccgcaagccagacgtgtcacaaagactagtctatcag
ttcgtccatccggtataa
DBGET
integrated database retrieval system
