KEGG   Danio rerio (zebrafish): 100005446
Entry
100005446         CDS       T01004                                 
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04010  MAPK signaling pathway
dre04137  Mitophagy - animal
dre04141  Protein processing in endoplasmic reticulum
dre04210  Apoptosis
dre04217  Necroptosis
dre04621  NOD-like receptor signaling pathway
dre04622  RIG-I-like receptor signaling pathway
dre04920  Adipocytokine signaling pathway
dre05132  Salmonella infection
dre05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100005446
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    100005446
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    100005446
  09143 Cell growth and death
   04210 Apoptosis
    100005446
   04217 Necroptosis
    100005446
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    100005446
   04622 RIG-I-like receptor signaling pathway
    100005446
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    100005446
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100005446
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100005446
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    100005446
   04121 Ubiquitin system [BR:dre04121]
    100005446
Enzymes [BR:dre01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100005446
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     100005446
Ubiquitin system [BR:dre04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    100005446
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-C3HC4_2 zf-RING_6 ATG16 zf-C3HC4_4 Sina_ZnF Plectin_PPL
Other DBs
NCBI-GeneID: 100005446
NCBI-ProteinID: XP_001344501
UniProt: A0A8M1Q288
LinkDB
Position
5:6337721..6356015
AA seq 584 aa
MAAQEPSPPSSMENNKPGFPKKILANKLEDKHLCNCCQNILRRPFQAQCGHRFCSYCFNR
TVGSGPQKCNACIKEDIFEEPTSILKQGCAFPDNAARREVENLPAVCFNEGCSWKGSIKD
YELSHEGKCEFMILPCPLCKELIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRYHVVGCDMLVEKEKIHEHERACA
HEHLNLLLHYIMGMKVSLEGLQPQSLDLAGHKAHELHQALRDLETRVSQLSGAPVQGVPS
SSSSSSASSSAAPPPPAPTATLPTSFTPLPSSVGAALELQLHSEKTKVADLGRRCQDLEV
KAGTFEDVVCVLNREVERFATTMEASNRQHRLDQDKIEALSNKVRQLERQVGVKDLTVAE
MEGRLREMSATTFDGVFIWRISDFTKKRQDAIAGRAPAMFSPAFYTSKYGYKMCLRIYLN
GDGTGRGTHLSLFFVVMRGMSDALLKWPFNQKVTLMLLDQSNREHIIDAFRPDITSSSFQ
RPVSEMNIASGCPLFCPLAKLEGKNSYIRDDTIFIKAIVDLTGL
NT seq 1755 nt   +upstreamnt  +downstreamnt
atggcagctcaagaaccctctcctccgtcctccatggagaacaacaagccagggttcccg
aagaagattctggccaacaaacttgaagataaacatttatgcaactgctgtcagaacatt
ctgaggagaccgttccaagctcagtgcggccatcgcttttgctcttactgcttcaaccgg
actgttggatctggaccacagaaatgtaatgcctgcatcaaagaggacatcttcgaagag
cccacgtcaatcctcaaacaaggctgcgcgtttcccgacaatgctgccagaagagaagtt
gaaaatcttccagccgtgtgcttcaatgagggctgctcctggaaaggcagcattaaagac
tatgagttaagccacgaggggaagtgtgagttcatgattctgccctgtcccttgtgcaag
gagcttattagatttaatgaacaggaacgtcacaacgaacgcgagtgtcccgagagaaca
ctcaactgcaaatactgtaaagaaccgtttcacttcaaaaacatcaaggcccacgatgag
atctgtcccaaatatcctatgatttgtgaaggatgtgcgaagaagaaaatccccagggaa
aagtatgttgaccacatcaagttctgcagcaaattcaggactccatgcagatatcatgtg
gttggctgtgacatgttagtggagaaggagaaaatccacgagcatgagcgcgcctgtgcc
cacgagcacctgaacctgctgctgcactacatcatgggtatgaaggtcagcctggagggt
ctgcagccccagagcctggatctggcgggccacaaagcacacgagctgcaccaggcgctg
cgggacctggagacacgggtcagtcagttaagtggagctcccgtgcagggggtcccgtcc
tcgtcatcttcctcctctgcctcttcatccgccgctccgcctccgcctgctcccaccgcc
acgctgcccacctccttcactcctctgcccagctcagtgggtgctgctctggaattgcag
ctccatagcgagaagaccaaggtggcggacctgggccggcgctgtcaggacctggaagtg
aaggccgggacgtttgaggacgttgtgtgtgtgctgaatcgagaggtggagcgcttcgcc
accaccatggaggccagcaaccgacagcacagactcgaccaggacaaaatagaggcactc
agcaacaaggtacgtcaactggagcgtcaggttggtgttaaagacctgactgtagcagaa
atggagggccgactgagagaaatgtctgcaaccacgtttgacggcgtcttcatctggagg
atttcagacttcaccaaaaagagacaagacgccattgctggacgagcacctgccatgttt
tcacctgcattttacacaagtaagtacggctataagatgtgcctgcgcatttacctgaac
ggggacgggacggggcgcgggacgcacctctcgctgttctttgtggtcatgagagggatg
agcgacgcgctgctcaaatggcccttcaaccagaaggtgactctgatgctgttggaccag
agtaaccgagagcacatcattgacgcctttcgtcctgacatcacgtcctcctcgtttcag
cggcctgtcagcgagatgaacatcgccagcggctgcccactcttctgccccctcgccaag
ctggagggcaagaactcctatatccgggacgacaccatcttcatcaaagccatcgtggac
ctgaccggcctctag

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