Danio rerio (zebrafish): 101882558
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Entry
101882558 CDS
T01004
Symbol
nlrp1
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1 homolog
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101882558 (nlrp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
101882558 (nlrp1)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
dre04054
]
101882558 (nlrp1)
Membrane trafficking [BR:
dre04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
101882558 (nlrp1)
Pattern recognition receptors [BR:
dre04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
101882558 (nlrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
NACHT
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
NB-ARC
AAA_16
Motif
Other DBs
NCBI-GeneID:
101882558
NCBI-ProteinID:
NP_001410790
ZFIN:
ZDB-GENE-120709-59
UniProt:
A0A386CAB9
A0AB13ABD9
LinkDB
All DBs
Position
2:48689886..48718592
Genome browser
AA seq
1355 aa
AA seq
DB search
MSSDYTDRNNLASAIKTLGDMLEKDEAFQRLMYNASTKGEINRGRVNKVFLKALLSAGDK
VGEFLNELIDHLNLFKVLGDFSWNPPVLKEAELNERTSQLRTQQHKYVERVSGFSHYGFG
ETGTPARGDITSPRGPQVASIEEDLATSKLAELLLAVGDHLEKIEKKGQFLPENVERFSL
DCFITSESVKLSSEAVELAPCYTEPVIIQRSKEQTEKYCQEYVRSPHTSSHLLSNDKTQS
IRIGQLFSPDSDGNTPKTVILCGDSGRGKSFVLEKIILDWVHLEHHFENFDAVFLLKYEE
LKCLSEEMSLTELLSRSCSLTSDQISQILQLTPEKVLFLIDGIDDFSFNAHIQISSPTDP
SQKAPVISIIHCLMRDLLLVESSVIVTTRYTAAAELSSLCKRPQRFTEIEGFSERRVQEY
FQKFFQDEQLFKKAYESMKTNETLLTFCSVPLLCWMVCFCLKKDADQVMTELKTTTSIYV
HFVSTLLEDHHQSQSFLRSLGQLAEEGMKNRQNLFDEKSVTRTGLDPATRVFMNKIYLKR
KKKHELLFKFKHLSFQEFFAALYYIMLDEEESWCKVSELFNMMESEALIHRSPPIFRGRL
SNPIPSVMMFLCGLFNKKVSSSLFEKMKSTFSHNVKLKKKELKKKLMKMIPAMIRQYGFE
LFALHCLYELQDERFVTKVLETHKFIDLSNVSLRSTDCLVLCYCLRLCPNIRELNFMNCD
LTAAKLKILQPALGLCETLRFSVEHLSEIGDLIQILSESKILRELKVREDEYGVESPRWS
FNLSVTRGDVLLTLSSSEKNPSFSSVLNIRLTCAQSQISRTDWTLFLQRLRKTGTLTEDS
SADDDHVSLQLSSLHSVGLKSLDLTLVSLNESWASGIISLIQNCTSLQQLKVSVTGLLLE
EGLKLLKKSLTDPHCTVIIEGRRNCSEPSEEHLRQSYEKVEIHFKPKLLEELAELSICNP
GSSALNIHCQSCVDVADSDQWVQVEPSVCRGEGGTEFRITTPAGRFQCSRTRMRWVCDGD
VTLHYRAVDGHFLNAELERLQCERVAPVLDVNVISGKLEEAHLPHYMCLAESDPALTNAV
KLLSVEDEGISLESVELTRFHAKILQPMFSPKTVLVKLGIPVKVHCDLLIFMTHTCPIIL
NVYFFPSDSLVEENIKTEEKSSHQIKCSRPEAPLQMKKQHSLEVPDAVVQPEAIKLRGNM
KPNFFQVKQPVVNDITMILSRVDDQKSVWTGTIWKKLIDIKLNKTESDLFQSGQKHKTSQ
PAHSFDKAQFFDTHWCNLIKSVENVDTVADKLLQKQIIHEQFYSEIIHHKSTSEESMRKI
CVIVRKGSAAVKEIFISILLQENPNLLNHLPSSDS
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtgattacacagaccgaaataacttagcttccgcaattaagacattaggagat
atgctagaaaaggatgaagcatttcagaggttaatgtataatgcgagcacaaagggagaa
atcaaccggggcagagtgaataaagtgttccttaaagcactactgtcagcaggagacaaa
gtaggagagttcttaaatgagctgatagatcatctgaacctgtttaaagttctgggtgat
ttcagctggaatcctcctgttttaaaagaagctgaattaaatgaacgaaccagccaactt
cagacccagcaggatgagtatgcaagtggatcctcccagtacggttttggggagacaggc
acttcagcaaggggtgacatcacctcaccaagagggccgcaagttgcaagcattaaagaa
gatctggcaatctcaaaacttgcagagcttatatttgaaattggaagtcatttggacaaa
atagaaaaaaagggtccatttttaccagagaatgtagaaaggttttcattggattctttt
attacctctgaaagtgttaaactttcatctgaagcagtggagctggcaccttgttatact
gaaccagtgatcattcagaggagcaaagagcagactgagaaatactgtcaagaatatgtg
aggtctccacacacatcatctcatctgttatcaaatgataagactcagagcatcagaatc
ggccagctcttcagtcctgacagtgatggaaacacaccgaaaactgtgattctctgtgga
gattctggaagaggaaaatccttcgtattagagaagatcatcttggactgggttcattta
gaacatcattttgaaaactttgatgctgttttttttctgaaatatgaagagctgaagtgt
ctttctgaggagatgagcctgactgagctcttgagcaggagctgcagtttaacctcagat
cagatctcacagatattacaattaaccccagagaaagttctgttcctcattgatggaatt
gatgatttttcatttaatgcacacattcaaatctcatcacctactgatccatcccagaaa
gccccagttataagcattattcactgcctgatgagggatctcctgctagttgagtcttct
gtgatcgtcaccactagatataccgctgctgctgaattaagcagtctatgtaaaagacct
cagcgtttcacagagattgagggtttctctgagagaagggtgcaggagtatttccagaag
ttttttcaggatgagcaactcttcaagaaagcatttgagagcatgaagaccaatgaaacc
ctcctgaccttctgttctgtgcctttgctgtgctggatggtctgtttttgcctgaagaaa
gatgctgatcaggtgatgacagaactaaagaccaccacatccatatatgtgcactttgtg
tcgactctgctggaggatcatcaccagagtcagtctttcctcaggagtcttggtcagctg
gcagaggaagggatgaagaaccgacaaaacctgtttgatgaaaagagtgtaaccaggact
ggcttagatcctgctactagagtgttcatgaataaaatttatcttaagcgaaagaaaaaa
catgaactacttttcaagtttaagcatttgagctttcaggagttcttcgctgctctttat
tatatcatgctggatgaagaagagtcttggtgcaaagtcagtgagctgtttaacatgatg
gaatcagaggctttaatccacaggtcacctcccatctttagaggcagattatcaaatccc
atcccttctgtcatgatgtttctctgtggcctctttaataagaaggtgagcagctcactt
tttgaaaagatgaagtctactttttctcacaacttaaagctgaagaaaaaagaactgaag
aaaaagctgatgaaaatgatccctgcaatgatacgtcagtatgggtttgaattgtttgct
cttcactgtctgtatgagctccaggatgagagatttgtcacgaaagttctggaaacacac
aagtttatggatctgtctaatgtttctctgaggagcacagactgtttggtgctgtgctac
tgtcttcggttgtgtccaaacatcagagagctgaacttcatgaactgtgatttaacagct
gctaaactcaagattcttcagccggctcttggtctgtgtgagactctgaggttttcagtg
gagcatctgtcagagatcggggatttgatccagattcttagtgaatcaaaaatcttgaga
gagctcaaagttcgagaggatgaatatggtgttgagagccctagatggtcatttaacctt
tcagtcactcgtggagatgtcttgttgactttgagctcatctgggaaaaatccatcattt
tcatcagtcttaaacatcagacttacatgtgcacaatcacagatatccagaactgactgg
acactctttcttcagagactccgtaagacaggaacattaactgaagactcttcagctgat
gatgatcatgtcagtttgcagctgtcttcacttcactctgtgggattgaagtcgttggat
ctgacgttggtcagtctgaatgagagctgggcttctgggatcatttccctcatccagaac
tgcaccagtttacagcagctcaaagtcagtgtcactggtttgctgttggaggagggactg
aagttactgaagaaatcactgacagatccacactgcaccgtgatcattgaagggaggagg
aattgcagtgaaccctcagaagagcacttgaggcaaagttatgagaaagtggagattcac
ttcaaaccaaagcttctggaggagctggcagagctgagcatctgtaaccctggatcttct
gcactcaatattcattgtcagtcctgtgtcgacgttgctgattcagatcagtgggttcag
gtggagccgtcagtctgtagaggtgaaggaggcacagagttcaggatcagcactccggcg
ggtcgattccagtgcagcaggaccagaatgcgatgggtttgtgatggagatgtcacactc
cactaccgggcagtggatggacatttcctcaacgcagagctggagaggcttcagtgtgag
cgagtcgctcctgtgctggatgtgaatgtgatctcagggaaactggaggaggctcatctg
cctcattacatgtgtttagcagagtcagaccctgcactcaccaacgccgtcaagctcctc
agtgttgaagatgagggaatatccttggagtctgtggagttgactcgctttcatgctaaa
atcctccaaccaatgttttctcctaagacagtgcttgtgaaactaggcataccagtgaaa
gtgcactgtgatctacttatcttcatgacacatacttgccccatcattctcaatgtgtat
tttttcccatccgattcacttgttaaagaaaatattaaaacagaggaaaaatcaagtcac
caaatcaagtgttcaaaacctgaagccctactgcagatgaagaaacaacacagccttgag
gttcctgatgctgttgttcaacctaaggcaatcaaattaagaggtaacatggagccaaac
ttctttcaggtcaaacaaccagtggtcaatgacatcactatgatcctcagccgagtggat
gatcagaaatcagtatggacaggaacaatttggaaagaactgatcgatataaaactaaac
aaaacagagtcggacttgtttcagtctggacaaaaacacaagacatcacagcctgctcgc
agctttgacaaagctcagttttttgatacacattggtgtaatcttattaaaagtgttaaa
aatgtgaacgccgttgcagacaaactgcttcaggaacaaatcattcatgatgaattatat
tctgaaatcacacatcccaattcaatcagtgaggacagcatgagaaagatctgcgtcata
gtgaggaaaggtagcgccgctgtcaaagagatcttcatctctattcttctgcaagaaaat
cccaatcttttaaatcatctgccttcatctgactcctaa
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integrated database retrieval system
