Danio rerio (zebrafish): 101886516
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Entry
101886516 CDS
T01004
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00310
Lysine degradation
dre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
101886516 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
101886516 (prdm6)
03036 Chromosome and associated proteins [BR:
dre03036
]
101886516 (prdm6)
Enzymes [BR:
dre01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
101886516 (prdm6)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
101886516 (prdm6)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
101886516 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_11
Zap1_zf1
zf-C2H2_15
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
101886516
NCBI-ProteinID:
XP_073766084
ZFIN:
ZDB-GENE-080618-1
LinkDB
All DBs
Position
8:652677..719966
Genome browser
AA seq
541 aa
AA seq
DB search
MLKPGEPSGSAFLKVDPSYIQHWQQLFPQSPLKPPPPVPVPVPVPLESLRLQRASLISSS
SSSSSSSSSTASPACSLFGQSLSTDGTAAPPQAKELCLSSNFKNDKSARLKLSSEELDYY
LYGQQRMEIIPLNSHNGDANNRCDMCADNRNGECPMHGPLHSLRRLVGTSSASGAAPPPE
VPDWLRDLPREVCLCTSTVPGLGYGICAAQRIPQGTWIGPFQGVPLQMDKLQTLRNTRHL
WEIYDQEGTLQHFIDGNEPSKSSWMRYIRCARHCGEQNMMLVQYRSCIFYRACTDIPRGT
ELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVTEALARQDSLQAFSKSPKASSVVLPRS
MVFPQSPCSRSFSLLDRSLHSDSSLTSSSSKQQRVLASPTSTSQLSSEFSDWHLWKCGQC
FKTFTQRILLQMHVCTQNPDRYDRRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYC
GRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPISESSESIEV
D
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggcgagcccagcggttctgctttcctcaaagtggacccaagttacatc
cagcactggcagcagctgttcccgcagagcccgctaaagccgccgccgccggtgccggtt
ccggtgccggtgccgctggagagcctccgcctgcagagagccagccttatctccagctcc
agcagcagcagcagctccagctcctccaccgcctcccccgcttgctccctcttcggacag
agcctgagcaccgacggcaccgcagcgcctccgcaagccaaagaactttgtttgtcgtcc
aactttaagaatgacaaaagcgcgcggctgaagctgagctcggaggagctggactactac
ctgtacggccagcagaggatggagatcatcccgctcaacagccacaacggagacgccaat
aaccgctgtgacatgtgtgctgataaccgtaacggcgagtgccccatgcacgggcccctg
cactctctgcggcgtctggtgggcaccagcagcgcctccggggccgcccccccgcccgag
gtcccggactggttgcgggatctgccgcgtgaggtgtgtctctgcaccagcaccgtcccg
ggactcggctacggcatctgtgcagcgcagcgcatcccgcagggcacctggatcgggccc
ttccagggggtcccactgcagatggacaaactgcagaccctcaggaacacccgacacctg
tgggagatttatgatcaggagggaacgctacagcactttattgacgggaacgagcccagt
aagtccagctggatgcggtatatccgctgcgcacgtcactgtggagagcagaacatgatg
ctggtgcagtacaggtcgtgtatattttaccgcgcctgcactgatattcctcgaggaacg
gagctgctggtgtggtataacgacagctacacgtctttcttcgggatcccactgcagtgc
atcgcgcaggacgaaaacttgaatgtgccgtctacagtaacagaagcactggcgcgtcag
gactctctgcaggcgttcagcaagagcccgaaggcctcgtctgtggttctgccgcgctcc
atggtgttcccgcagtcgccctgcagccggagcttctctctgctggaccggagcctccac
agcgactccagcctgacctccagcagctccaagcagcagcgcgtgctggccagccccacc
tccaccagccagctcagctccgagttcagcgactggcacctgtggaagtgcggccagtgc
ttcaagaccttcacgcagaggatcctgctgcagatgcatgtgtgcacgcagaaccccgac
aggtacgaccgcaggccgtatcagtgtggtcactgctctcagtcgttctcccagccgtcg
gagctgcggaatcacgtggtcacacactccagcgatcggccgttcaaatgtggatactgc
ggccgtgctttcgccggtgccaccacactcaacaaccacatccgcacacacaccggggag
aagcctttcaagtgtgagcggtgcgagcgcagcttcactcaggcaactcagctcagtcga
caccagcggatgcccaacgagtgtaaacccatcagcgagagcagcgagtcaatcgaggtg
gattaa
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integrated database retrieval system
