Danio rerio (zebrafish): 102725535
Help
Entry
102725535 CDS
T01004
Symbol
trpc6b
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
102725535 (trpc6b)
Ion channels [BR:
dre04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102725535 (trpc6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_4
Cas8b_C
Motif
Other DBs
NCBI-GeneID:
102725535
NCBI-ProteinID:
XP_002665445
ZFIN:
ZDB-GENE-081030-19
Ensembl:
ENSDARG00000067730
UniProt:
A0A8M1RKV1
LinkDB
All DBs
Position
18:41768014..41809890
Genome browser
AA seq
858 aa
AA seq
DB search
MSTDHTSAKHSSVHQRMNADFEKYPRYCKRWSNDDIHRHALAKSRRMAMRRPAHMFNARY
NNLSPTEERFLEAAEYGNIPVIRRMLEELPELNVNCVDYMGQNALQLAVANEHLEVTELL
LKKENLARIGDALLLAISKGYIRIVEAILSHQAFADTTKLTSSPLQAETQDDFFAYDEDG
TRFSHDITPIILASHCHEYEIVHILLRKGACIARPHDYFCKCNGCLYHQRHDSFSHSRSR
INAYKGLASPAYLSLSSEDPVLTALELSNELAVLANIEKEFKNDYKTLSMQCKDFVVGLL
DLCRNTEEVEAILNGDTEAGGHFDKGDRPNLVRLKLAIKYELKKFVAHPNCQQQLLSIWY
ENLSGLRQQTTAVKLLVVLGVVVGLPILALLYWIAPSSKLGKIIRGPFLKFVAHAASFTI
FLGLLIMNAADRFEGTSLLPNMTIHDHPSQLFRMKTTPFTWMEMLIISWVVGMIWAECKE
IWSLGPREYLLEPWNLLDFGMLAIFVTSFIARFMAFYHANVAQNYVDKRYTDLSNITLPL
EIEYYRLARVHWVPSDPQLISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDI
FKFMVIFIMVFVAFMIGMFNLYSYYRGAKQNGAFTTVEESFKTLFWAIFGLSEVKSVVIN
NGHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINNSFQEIEDDADVEWKFARAKLWFSYF
EEGGTLPVPFNLIPSPKSVISLAMRLKRLLLIPLHRHKEDLKEDTELNESGKQKESSEKN
SPHTSRYQRIMKRLIKRYVIKAQTDKEGDEVNEGELKEIKQDISSLRFELLEEKSRQTEE
LAELVRRLEERLISQYKI
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgatcacacttctgccaaacactcctctgtccatcaacggatgaacgccgac
ttcgaaaagtatccccggtactgcaaaaggtggagcaatgatgacattcacaggcatgca
ctggctaaaagccgtcgcatggctatgcgaagaccggctcacatgtttaatgcccgttac
aacaatctatccccaactgaagagcgtttcctagaagcagccgaatatggaaatatccct
gtcatccgtaggatgctagaagaactcccagaacttaatgtcaactgtgtggactacatg
ggccagaatgcattgcaactcgcagttgccaatgagcaccttgaagtgacagaactcttg
ctgaagaaggagaacctggcccgcataggtgatgctctgcttttagccataagcaaaggc
tacattcgtattgtggaggccattttgagccaccaggcctttgctgacacaaccaaactc
accagcagcccccttcaggcagagactcaagatgacttctttgcctatgacgaggacggt
actcggttttcccatgatatcacacccattatattagcttctcattgccacgaatacgag
attgtgcacattctcctaaggaagggtgcctgcattgcgcgcccacatgactacttctgc
aaatgcaacggctgtctttatcaccagaggcatgactcttttagccactcacgctccaga
atcaatgcctacaaggggctggcaagtccagcttacctgtccctgtccagcgaggaccca
gtactaacggctctggagctcagcaatgaactggctgtacttgccaacatagaaaaagag
tttaagaatgattataagacgctgtctatgcaatgtaaggattttgtagttggacttctg
gatctgtgtcgcaatacagaggaagtggaagccattttaaacggagacacagaggcgggg
ggccactttgacaagggtgacagacctaatctagttcgattaaagctagccatcaaatac
gagctgaaaaagtttgtagcccatccaaactgccaacagcagcttttgtccatatggtat
gagaatctgtctgggctcaggcagcagaccacggcggtcaagttactggtggttctgggg
gtggtggttggacttcccatcctggccctactgtactggatagcaccctcaagcaagttg
gggaagatcatccgtggtcccttccttaaatttgtggcacatgcagcgtctttcacgatc
tttcttggccttctcatcatgaacgccgctgaccgttttgaaggaacttctcttttacca
aacatgaccatccatgatcatccatcccagttgttccgcatgaagaccaccccttttacc
tggatggaaatgctgatcatttcctgggttgtaggaatgatttgggctgaatgtaaagaa
atttggtctcttggtcctcgggaatatctactggagccttggaatttgctggattttgga
atgctggccattttcgtgacttcgttcattgctagatttatggcattttatcatgcaaat
gttgcacagaactatgtggataagcgctacacggatctgtcaaacattacgttgcccctt
gagattgaatactatcgcctcgctcgtgtccactgggttccatcagatcctcagctgatc
tcagagggactttacgccatcgcagtggttttgagcttctctcgtatcgcgtacatcctt
ccagccaacgagagctttggacccttgcagatctcccttggcaggacggtcaaagacata
tttaaattcatggtgatcttcataatggtgtttgtggccttcatgattggaatgtttaac
ctctactcatactaccgaggagcgaagcagaacggcgccttcaccactgttgaggagagc
ttcaaaactttattctgggctatttttggactttccgaggtcaagtctgtcgtcatcaac
aacgggcacaaattcatcgagaatattggctacgttctttatggagtctacaacgttacc
atggttatcgtcttactcaacatgctcatcgctatgatcaacaactcatttcaggaaatt
gaggatgatgcagatgtggagtggaagtttgccagggcgaagctgtggttctcatacttt
gaggaaggagggactctccctgtgccgtttaacctcatccccagccctaaatcagtcatc
agcctggctatgagactcaaacgcctactgctgattcctcttcacagacacaaagaggac
ctaaaggaggacacagagctcaacgagtctggaaaacaaaaagagtccagtgagaagaat
tcacctcacacaagtcgttatcagaggatcatgaaacggctaatcaaacgatatgtgatc
aaagcacagaccgataaagaaggagatgaggttaatgaaggggaactaaaggagatcaag
caggacatctccagtttacgctttgagctcctggaggaaaagtcccgtcagacggaggaa
ctagcagaactggtccgacgactagaagaaagactaatcagtcaatacaaaatatag
DBGET
integrated database retrieval system
