Danio rerio (zebrafish): 108191529
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Entry
108191529 CDS
T01004
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dre04515
]
108191529
Cell adhesion molecules [BR:
dre04515
]
Cadherins
Protocadherins
108191529
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
DUF3006
HpiC1-like
Motif
Other DBs
NCBI-GeneID:
108191529
NCBI-ProteinID:
XP_017213610
UniProt:
A0A8M6Z8Y8
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Position
10:21780081..21782712
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AA seq
820 aa
AA seq
DB search
MRTQIQRRILCWRALWLLCFAVLWSDADAQLRYTIPEELKEGSVVGNVAKDLGLDVSETS
NRKLRIASESGKQYFSVNLRNGELLVNNIIDRETLCGQSASCVLPLQIIIEDPLQFYRVE
VEIQDINDNSPIFWSEINTIDVPESTLTGTRFRLKPAQDPDVGTNSLRTYALNKNEHFAL
HVKNEKDGTKVPEIVLQKAVDREKQSVHHLILTGIDGGDPARSGTTQITVKILDANDNAP
VFEQDLYEVKVMENTVPDTMIHTVKAIDLDEGINAELEYSFAADTPEITQDVFTINPVTG
ELVVSKNLDYETSTSYKIDIRARDKGAPVMEGHCRVQVNVLDVNDNAPEITITSSPKPVQ
EDAPAGTMVALINVKDLDSGVNANVTLSMSSDTPFKLKPTFANHYALVTDSQLDREKFPK
YDIELKASDSGSPPLVSSKLITVNILDVNDNPPAFSERVYSVYIKENSAPGSILASVTAS
DLDTGENAKIVYSVLDTNTRDVPVSSYVYINAENGSIFSMHSFDYEKIKVFHIIVLAKDQ
GSQSLSSNATVHVFILDQNDNAPAVIYPSTSMGSVSHQRMPRSAKTGHLVTKVTAVDADS
GHNAWLFYRLAEATDASLFSVNLHTGEVRTKRAVSEHDDSSQRLVIEIKDNGEPVQSTTV
TVDILIEEGVYEPISEYNMKTTENNNKKSGKITLYLIISLGTVSVLSVLTLFTLIVKCVK
SSIGSSSCCIRRTDSGYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFGSYLSPMSE
FSDLTLIKPSSTTNFTDTLNTLDASLPDSAWTFESQQVSV
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaggactcaaatacaaaggagaattttgtgctggcgggcgctgtggctgttgtgtttc
gccgttttgtggagtgatgcagacgcgcagctccgttatacaataccggaggagctaaag
gagggatctgttgttggaaatgtagctaaagatctcggtttggatgtatctgagacatct
aatcgtaaattacggatagcatctgagtctggtaagcaatatttcagtgtaaatttgagg
aatggcgagctacttgtgaataacattatagacagagaaacattgtgcggacaaagcgcg
agctgtgtgttaccattacaaatcatcatcgaggatccactgcagttttatcgtgtagaa
gtagaaatacaagatattaatgacaactctccaatattttggtcggaaataaacacaatt
gatgtgccagagtcaaccttaactggtacaaggtttcgtttaaagcctgctcaagatcct
gacgttggaacaaactcgttacgcacttacgcgcttaataaaaatgagcatttcgctttg
cacgtaaaaaacgaaaaggatggaacaaaagtccctgaaattgttttacaaaaagctgtc
gacagagagaaacagtctgtacatcatttaattttgacaggtattgatgggggtgatcca
gcgagatcaggaactactcagattactgtgaaaattctagatgcaaatgataatgctcct
gtatttgaacaagacttatatgaggttaaagtgatggagaacacagtaccagatacaatg
atacacactgtaaaagctattgacttagacgaaggtataaatgctgagcttgagtattct
tttgcggcagatacaccagaaataactcaagatgtatttactattaatcctgtgacaggg
gaattagtagtttccaagaatcttgattatgaaaccagcacctcatataaaattgacata
cgcgcaagagacaaaggagcgcctgttatggaaggacattgtagagtccaggtgaatgtt
ttagatgtgaatgataatgcacctgagattaccatcacatcctcacccaaacctgtgcaa
gaagatgcgcctgctgggacaatggtagctttaataaatgttaaagatctggattccggc
gtaaatgcaaatgtaacacttagcatgtcatcagacactccttttaaattaaagccaaca
tttgcaaaccattacgcactggtaacagattcacagttagatcgagaaaagtttcctaaa
tatgatattgagctcaaagcatcagattctggatcacctccactggtatcaagcaaactc
attacagttaatatactagatgtcaatgataatcctcctgctttctctgaacgtgtgtac
tcggtttacataaaagaaaacagcgctccaggatcgatattagcatcggtgacagcatca
gatctagatacaggagaaaatgctaaaattgtgtattcagttctggatactaatactcga
gacgtacctgtctcttcctatgtatacataaacgcagaaaatggcagtatatttagcatg
cactcgtttgattatgagaaaataaaggtctttcatattattgtgcttgccaaagaccaa
ggctcccaatctctgagcagcaacgctactgttcatgtatttattctggaccagaacgat
aatgcacctgctgtcatttacccgtccacatctatgggctcggtctctcatcagaggatg
ccccgttccgctaaaacaggacatcttgttactaaggtaacggcagtggacgcggactcg
ggtcataacgcctggctgttctacaggctcgcggaggccacggacgcgtctctgttcagt
gtgaatttacatacgggagaggtgaggactaaacgcgctgtttcagagcacgacgactcc
tctcagagactggtcatagagatcaaggataatggagaaccagtgcagtccaccacagtt
accgtggatatactgatagaggaaggcgtttatgagcccatctcggaatataacatgaaa
actacagaaaacaacaacaaaaaaagtggcaaaatcactttgtatttgatcatctctttg
ggaaccgtatcagttttatctgtgttgacattgttcacgttaattgtgaaatgcgttaaa
agcagcatcggaagttcaagctgctgcatcagacgaactgattctggatacaaaaacccc
aacagaaacctgcagatccagctcaacactgacgggcccattaagtatgtggaggttctg
ggaggagatatgatgtctcagagtcagtcctttggctcttatctctctccaatgtctgaa
ttcagtgatctcactctcattaagcccagcagcaccacaaactttacagacacgctaaac
acgcttgatgcgtcattaccagacagcgcgtggacgttcgagagccaacaggtgagcgtg
tga
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