Danio rerio (zebrafish): 30158
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Entry
30158 CDS
T01004
Symbol
lfnG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe precursor
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00514
Other types of O-glycan biosynthesis
dre04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
30158 (lfnG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
30158 (lfnG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dre01003
]
30158 (lfnG)
Enzymes [BR:
dre01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
30158 (lfnG)
Glycosyltransferases [BR:
dre01003
]
Glycan extension
O-Glycan
30158 (lfnG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
30158
NCBI-ProteinID:
NP_571046
ZFIN:
ZDB-GENE-980605-16
Ensembl:
ENSDARG00000037879
UniProt:
Q8JHF2
B2GQK5
LinkDB
All DBs
Position
3:40940676..40950095
Genome browser
AA seq
374 aa
AA seq
DB search
MLKTYRGKVVVSLAGATVTCLGFLLFLSQHQRIQADGMQNESEVGLRSLQSLGDSETDDG
AQPEQNAKKGFSAYFSKLTRSRREADKPSEAPGAATDAPPAEDISADDIFIAVKTTKKFH
RSRLDLLLDTWISRNMRQTYIFTDGEDEELKKKIGSHAINTNCSAAHSRQALSCKMAVEY
DKFIESGKKWFCHVDDDNYVNTKTLVKLLSNYPHTQDMYIGKPSLDRPIEATERLGDNKM
RPVNFWFATGGAGFCISRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIIESVLGVSL
TRSSLFHSHLENLQQVSKSEVHKQITLSYGMFENKRNIINMKGAFSVEEDPSRFKSVHCL
LYPDTPWCPPQVAY
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaacatatcgcggaaaagtcgtggtctctcttgcgggagccaccgtcacctgt
ctggggtttctgttgtttctctcgcagcatcagcggattcaggcggacgggatgcagaac
gagagcgaggtcgggttgcgctctctccagagtctgggagattcagagactgatgatgga
gctcagcctgagcagaatgcaaagaaaggattctctgcctatttttccaagctgacccgc
agcaggagggaagcggataagcccagcgaggcacccggagcggcgacagacgcgccgcct
gcggaggacatcagcgcggatgacatcttcatcgcagtgaagaccactaaaaagtttcac
cggtccagactggatctactgctggacacctggatctccagaaacatgcaacagacatac
atcttcacagacggcgaggatgaggagctgaagaagaaaattggaagccatgcaatcaac
accaactgctctgctgcccacagtcgccaggctctgtcctgcaagatggctgttgaatat
gacaagttcattgagtctggaaaaaagtggttctgtcatgtggatgatgataactatgtg
aacacgaagacacttgtgaagttgctctccaactaccctcacactcaggacatgtacatt
ggcaaacctagcctggacaggccaattgaggctacagaaagacttggggacaacaaaatg
agacctgtgaatttctggtttgccactggaggagctggtttctgtatcagccgtgggctt
gctttgaagatgagtccatgggcaagtggtggccatttcatgaacactgctgagaagatc
cgtcttcctgatgactgtaccattggctatatcatcgagtcagttcttggggtctctttg
acccgaagtagcttgttccactcgcacttagagaacctgcaacaggtgtccaaatcagaa
gtacacaaacagattacattgagttacggaatgtttgaaaacaagaggaatatcatcaac
atgaaaggggctttctctgttgaggaggacccatccaggttcaagtcagtgcactgtctg
ctgtatccagacactccttggtgccctcctcaggttgcctactaa
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