Danio rerio (zebrafish): 30310
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Entry
30310 CDS
T01004
Symbol
tcf3a
Name
(RefSeq) transcription factor 3a
KO
K09063
transcription factor E2-alpha
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
30310 (tcf3a)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
30310 (tcf3a)
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GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
30310
NCBI-ProteinID:
NP_571169
ZFIN:
ZDB-GENE-990415-51
Ensembl:
ENSDARG00000005915
UniProt:
Q90491
LinkDB
All DBs
Position
2:complement(57302175..57378748)
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AA seq
583 aa
AA seq
DB search
MATVGTDMELNDLLDFSIMFPHPMSNGKSRGPNIPSSQFGLDDRNDSGSWGSEANSPSFG
ARLYGDGHHYPEHDNMYNLEIDGKSERGYPVTQLLPGEINIAASDALSPPGMKGSSQFYS
PHRRRPAESSIDPLPKKRKVPHGLPTSISAYPGSTGDDYNQDSAGYPGSKPGNLYPGFFN
VQEGLPDHWGQSGYPPVMSNFINPQKPQPLPVSPQNYPLHGSEVNLPSSFHSVPAGYGVP
NHTPPISSSEGIMGNRGANAGSSGAEIGKALASIYPSDNNGSNFSSTPSTPVGSPSNVAA
SASQWPKGSSQPAPSPGFEAGLAQSKLDDRLGEALHVLRNHHAVGTDMQSLLSAAISGHS
AGAAALGSLRQAFGLANRLPGLMSNHSEDAAGLPQSSALLQGHHTSHQPPPSSQSDTFTS
LSLARSSHASSSDIKREDKDDDENLSIADKSEDEKKDGKSRTRTSQDEDEDEDDEDLPVE
VKAERERERRMANNARERLRVRDINEAFKELGRMCQLHLSNEKPQTKLLILHQAVNVILN
LEQQVRERNLNPKAACLKRREEEKVTGEAQMLSGLGGDGHAHM
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtgggcaccgacatggagctcaatgacctgttggatttcagtattatgttc
cctcatccaatgtcaaacgggaaaagcagaggccccaatatacccagcagtcagttcggt
ttagatgacagaaatgactccggctcctggggttcagaagcaaacagtccttcattcggc
gcacggctgtatggagacggccatcactatcctgaacatgacaacatgtacaacttagag
attgacggtaaatcagagcgaggttaccctgtcacacagctcctgccgggtgagatcaac
atcgcagcttctgatgctctttctcctcctggaatgaaaggctcttctcagttttacagt
ccgcaccgccgcaggcctgcagagtccagtatagatccactgcccaaaaagaggaaggtt
cctcacggcctgccgacgtccatatcggcgtatccaggctctactggtgacgattataac
caggacagcgccggataccccggatccaaacctggaaacctttatccaggtttttttaat
gtccaagaaggactcccagatcattggggtcagtctggatatcctccggtcatgagcaac
ttcataaacccacagaagcctcagccgctgccggtgtctccgcagaactaccctcttcac
ggcagcgaggtcaatttaccctccagcttccactcggttcctgcaggttacggcgttccc
aaccacacaccacccatcagctccagcgaaggcatcatgggaaacagaggagcaaacgct
ggcagctccggtgcagagatcgggaaagctctggcttcgatatatccatcagacaataat
ggcagcaacttctcctcgacgccgtccactcctgtgggctctccttctaatgtggccgcc
tctgcatctcagtggcccaaaggctcctctcagcctgcgccatcgcctggttttgaagca
ggattggcacagagtaagctagatgaccgtctgggtgaagcgctgcatgtgttgaggaat
catcatgcggtgggcacagatatgcagagtttgctgagcgctgccatctctggtcattcg
gctggtgctgcggctctgggctccctacgtcaggccttcggtctcgccaaccgtctgccg
ggcctgatgtcaaatcacagtgaagacgccgcaggtttaccgcagtccagtgctcttctg
cagggacaccacacttcccatcagcctccaccgtcctctcagtctgacaccttcaccagt
ctctctttggctcgctcgtctcacgcctccagctcagatataaagagagaagacaaagac
gacgatgagaatctgtctatcgcagataaatcagaggatgagaagaaagatggaaaaagc
cgcacgagaacgagtcaagacgaggacgaagacgaggatgatgaggatctgccggtggag
gtgaaggcggagcgggagcgtgagcggcgaatggccaataacgcccgcgagcgtctgcgt
gtgcgcgacatcaacgaggccttcaaagagctgggccgcatgtgccagctgcacctgagc
aatgagaaaccgcagaccaaactgctgatcctgcaccaggccgtaaacgttattctcaac
ctggagcagcaagtacgagagcgtaacctgaacccgaaggcagcatgtctgaagcggcgg
gaggaggagaaggtgacgggtgaagcgcagatgttgtctggtctaggtggagatggacac
gcacacatgtaa
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