Danio rerio (zebrafish): 323011
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Entry
323011 CDS
T01004
Symbol
lgi1a
Name
(RefSeq) leucine-rich glioma-inactivated protein 1a precursor
KO
K25428
leucine-rich repeat LGI family member 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
323011 (lgi1a)
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRRCT
CENP-N
Motif
Other DBs
NCBI-GeneID:
323011
NCBI-ProteinID:
NP_955921
ZFIN:
ZDB-GENE-030131-1731
Ensembl:
ENSDARG00000020493
UniProt:
Q2HPG2
F6NUE1
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All DBs
Position
13:421231..430144
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AA seq
537 aa
AA seq
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MMCLRRAAVLCVLLAALVLGGRRRSSRCPAPCTCSKDNALCANTGAIPRSFPQDVISLSF
VKSGFTEIPKESFIHTPALHLLLFTANSFDSINEDAFLGLPHLEYLFIENNQIKSISPFA
FRGLKSLIHLSLAYNNLETLPKDLFKGMEALTKVDLRGNLFSCDCKLKWLVDWMFHTNAT
VDQIFCNGPEGYQGKKINDLEAQTFDCITTDFTLLKSLEFQSISVEAFSFAGDQFVVFAQ
PFSGRCSFMEWDHVQMEFRNFDNITSTSTVICKPLVIDSQLFIIVAQLFGGSHIFKRDVS
ANKFIRIQDIDILKIRKPNDVEIFEVDGESFFIIADSSKAGSTTIYKWNGNGFYSYQSLH
PWHRDTDVEYLDISGKPHLILSSSSQRPVVYQWSRGSAQFERRTDIPEMEDVFAVKHFTV
KNELYICLTRFIGDSKVMRWDGSMFTEIQTVASRGSMVFQPFSVASWQYAILGSDYAFTR
VYRWDAKKRQFVPFQELNIQAPRAFSLVFIDNREFLLGSSFKGQTRIYEHLVLDLSS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtttgcggcgggcggcggtgctgtgcgtgctgctggcggcgctggtgctcggc
ggccggaggaggagctcccgctgccccgcgccctgcacctgcagcaaggataacgcgtta
tgcgccaataccggagccataccgaggagcttcccgcaggacgtcatctcactatcattc
gtcaaatccggctttactgagatccccaaagagagtttcattcacacacctgcactacac
ctgcttctcttcacagcaaacagcttcgactctataaacgaggatgcgttcctcggtctc
cctcatctggagtatctattcattgaaaacaaccagatcaagtccatatcgccgttcgcc
ttcagaggactcaagtctttaattcacctaagtctggcgtacaataatctggagacgctg
cccaaagacctcttcaaggggatggaagctttgactaaagtggatctgagagggaatctg
ttcagctgtgactgtaagctgaagtggttggtggactggatgtttcacacaaacgctaca
gtggatcagatcttctgcaacggccctgaagggtaccaggggaaaaaaatcaacgatctg
gaggcgcagaccttcgactgcatcaccacagattttaccctgctgaagtctctggagttt
cagtccatctcagtggaggctttttccttcgctggtgatcagttcgtagttttcgctcag
cccttcagcggcagatgcagcttcatggagtgggatcacgtgcagatggagttcagaaac
ttcgacaacatcacgagcacatccacggtcatctgcaaacctctagtcatcgacagccag
ctcttcatcatagtagctcagctgttcggcggctcgcacatcttcaagcgcgacgtctcc
gcaaacaaattcatcagaatccaagacatcgacatcctgaagatccgcaagcccaacgac
gtggaaatcttcgaggtagacggagagtccttcttcatcatcgccgacagctcgaaagct
ggctccaccaccatctataagtggaacggaaacgggttttactcctaccagtcgctccat
ccttggcaccgcgacaccgatgtggagtatctggacatttctggaaaaccgcatctgatt
ttatccagcagttcgcagaggcctgttgtttaccagtggagccggggcagcgctcagttc
gagaggcgcactgacatcccggagatggaggatgtgttcgcggtcaaacattttacggtg
aaaaacgagctgtacatctgcctgacgcgcttcatcggcgactccaaagtgatgcggtgg
gatggcagcatgtttacagagatccagaccgtggcttcccggggctccatggtgttccag
ccgttctccgtggccagctggcagtacgccatcctgggcagcgattacgccttcacacgg
gtctaccgctgggacgccaagaagaggcagttcgttcccttccaggagctgaacatccag
gcgcccagggctttctctctggtgttcatcgataacagggagttcctgctggggtccagt
tttaaggggcaaacgcggatatatgagcatctggtgctggacctgagcagctga
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