Danio rerio (zebrafish): 334393
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Entry
334393 CDS
T01004
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
334393 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dre01007
]
334393 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dre03016
]
334393 (iars1)
Enzymes [BR:
dre01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
334393 (iars1)
Amino acid related enzymes [BR:
dre01007
]
Aminoacyl-tRNA synthetase
Class I (U)
334393 (iars1)
Transfer RNA biogenesis [BR:
dre03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
334393 (iars1)
Prokaryotic type
Other AARSs
334393 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
334393
NCBI-ProteinID:
NP_956190
ZFIN:
ZDB-GENE-030131-6325
Ensembl:
ENSDARG00000007955
UniProt:
A0A8N7UZX0
LinkDB
All DBs
Position
11:complement(1337620..1392468)
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AA seq
1271 aa
AA seq
DB search
MVEAVPESIHFPTEEEQILQFWQKNDCFQECLKQSKSRPRFTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQNGFHVERRFGWDCHGLPVEYEIDKSLNIKGPEDVMKMGIEEYNKQC
RSIVMRYADEWENSVRRMGRWIDFRNDYKTLYPWFMETVWWVFKQLYDSGLVYRGVKVMP
FSTACNTPLSNFEANQNYKDVQDPSVIVNFPLLEDPSVSLIAWTTTPWTLPSNLALCVNP
ELIYVRVKDNSSQKIYIMMEARLVALFKSDSEYTILERFPGKTLKGKKYKPLFEYFIKCK
ETGAFSVVMDNYVRDDDGTGVVHQAPYFGADDYRVCMEYDIIQRDSAPICPVDPSGIFTP
EVTHFAGQYVKDADKNIIKWLKENGRLVSASSFKHSYPFCWRSDTPLIYKAVPSWFIRVE
HMVEKLLDNNSKCYWVPEFVKEKRFGNWLRDARDWAVSRNRYWGTPIPLWVSDDFEEVVC
VGSMAELEELTGIKVTDLHRESIDGLTIPSRCGKGQLRRVSEVFDCWFESGSMPYAQVHY
PFENRREFEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPGLIVQSYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLVQNVQRLQKEEGVEFLYNERTSSVSNNIMDKWIQSFTQSLIQFFRDEMGAYRLYTVV
PKLVKFVDMLTNWYVRMNRRRLKGESGSEDCVRALETLFSVLFSMCRLMAPFTPFITELM
YQNLRHLLDPAAVEEKDTGSIHYLMLPQVRESLIDQRIESAVSRMQSVIELGRVIRDRKT
LPIKYPLKEVVVIHQDPEALTDIQSLQNYILEELNVRQLTLSTDKDRYGIRLRAEPDHMV
LGKRLKGAFKSVTASIKELKSEELEEFQKTGCIVVDGHDLREEDLRLMYTFDQSSGSASQ
YEAHSDAQVLVLLDVTPDQAMLDEGVAREVINRIQKLRKKGHLVPSDEITVFYRCQPAGE
YLHQVIEAHTDFILATTKAPLRAYPVCPNASVIVQENTQLKGSDLELTIVRGSSSSSVCR
APVSGSACAFVNLRVSLKDKQQDGVVLLENPKGDNRLDLEQLKRICCSVFGLNGAPVSIF
NGKTALSSSTDLLSLSGRTLTVSSAAGSSPADVSSSESLLCPYVNLQLVNASPAECRTGD
VATLLLMNPEGKNLLQFSDLLRETAKVFGLRGRRLMLYTDPQLTAELKASSMKTLNSKTL
YVKVLPTTAEA
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagcagtgccagagtccatccacttccccactgaggaggagcaaatcctgcag
ttctggcagaagaacgactgtttccaggagtgtctgaagcagtcaaagagccggcccagg
ttcacgttctacgacgggccgcccttcgccacaggtctgcctcactatggtcatattctg
gcgggaaccatcaaggacatcgtgacgcgattcgctcatcagaacggcttccacgtggag
cggcgcttcggctgggactgccatggcctgccggtggagtatgagatcgataaatctctg
aacatcaaaggacccgaggatgtgatgaagatgggcatcgaggagtacaacaaacagtgc
cggagcatcgtcatgagatatgctgatgagtgggagaactcggtgaggcggatggggcgc
tggattgacttcaggaacgactataagaccctctacccctggttcatggagactgtgtgg
tgggtgtttaagcagctgtatgacagtggtctggtgtaccgcggggtgaaggtgatgccg
ttctccaccgcctgcaacactccgctctccaactttgaggccaatcagaactacaaggat
gtgcaggacccgtcagtgatcgtcaatttcccgttgctggaggatccgtctgtcagcttg
atcgcctggaccaccacaccctggaccctccccagcaacctggcactctgcgtcaaccca
gagctcatctacgtccgggtcaaagacaacagctcacagaagatctacatcatgatggag
gccagactcgtcgctctcttcaagtctgactctgaatacaccattctggagcgatttcct
ggcaagactctgaagggcaaaaaatacaagcctcttttcgagtacttcatcaagtgtaag
gagaccggtgccttctcggtagtgatggataattatgttcgtgatgatgacggtacagga
gtcgtccatcaggccccgtacttcggagctgatgattatcgtgtgtgtatggagtatgac
atcatccagagagactccgcccccatctgcccggtcgacccatctggcatattcactccg
gaggtcacacacttcgccggacagtatgtgaaggatgcagacaaaaacatcatcaagtgg
ctgaaggagaacggacgtctggtgagcgccagctccttcaagcacagctacccgttctgc
tggaggtcggacacgccgctgatctacaaagcagtgcccagctggtttataagggtggag
cacatggtggagaaacttctggacaacaacagcaagtgctactgggtgccagagtttgtg
aaggagaagcgtttcgggaactggctgagggacgccagggactgggcggtgtcccgcaac
cgctactggggcacacctatccctctgtgggtcagtgacgacttcgaggaggtggtgtgt
gtgggatccatggcggagctggaggagctgacgggaattaaagtcactgatctccaccga
gaaagcattgacggcctcaccatcccctctcgctgtgggaaagggcagctccggcgggtt
tcggaggtgttcgactgctggttcgagagcggcagtatgccctacgctcaggtgcactac
ccgtttgagaacaggcgcgagttcgaagacgcattccctgcagacttcatcgcagagggc
atcgaccagaccagaggatggttctacacgttactcgtgctctcgacggctctgtttggg
aaaccgccattcaagaacgtgatcgtcaacggtttggttttggccagtgatgggcagaaa
atgagcaagcggaagaagaattaccccgaccccggactcatcgtgcagagctacggtgca
gacgcactacggctgtatctgatcaactctcctgtggttcgagctgaaaacctgcgcttc
aaagaggaaggagttcgagatgtgctgaaagacgtcttcctaccctggtacaatgcatac
cggttcctggtgcagaacgtccagagactgcagaaggaggaaggcgttgagttcctgtac
aacgagaggacgtccagcgtcagcaacaacatcatggataaatggatccagtctttcaca
cagtcactcattcagttcttccgggacgagatgggagcctacagactctatactgtggtg
cccaagcttgtcaagtttgtggatatgctcactaactggtacgtgcggatgaaccgccgg
cggctgaagggtgaaagtggttctgaggactgcgttcgtgctctggaaaccctcttcagt
gtcctgttctccatgtgcagactgatggctccgttcactccgtttataaccgagctgatg
taccagaacctgcggcacctgctggacccggcagcagtggaggagaaggacaccggcagc
atacactacctcatgctgccacaagtcagggagtctctgattgaccagcgtattgagagt
gcggtgtctcggatgcagtcggtcattgagttgggtcgtgtaatcagagacaggaagact
ctgcccatcaagtatccgctgaaggaggtggtggtcatccatcaggacccagaggctctc
actgatatccagtccctgcagaactacatcctggaggagctgaacgtgcgccagctcact
ctctccactgataaggaccgatacggcatccgtctgcgggccgaacccgatcacatggtg
ctgggcaaacggctgaaaggagcctttaaatccgtgaccgcgtccatcaaagagctgaag
agtgaagagctggaggagttccagaagacaggttgtatagtggtggatggtcatgacctg
cgtgaggaggatctgcgtcttatgtacaccttcgatcagtcgtctggatccgcgtctcag
tacgaggctcactcagacgctcaggtgctggttctgctggacgtcacgccggatcaggcc
atgctggacgaaggagtggcccgagaggtcatcaaccgcatccagaaactgcgtaagaag
ggtcacctggtgccgtcagatgagatcacggtgttctaccgctgtcagccggctggtgaa
tatctgcatcaggtgattgaggcacacacagacttcatcctggccaccactaaagctccg
ctcagagcgtaccccgtgtgtcccaacgccagcgtcatcgtgcaggagaacacacagctg
aagggctcagatctggagttgactatcgtgcgaggctcctcctcttcctccgtctgcagg
gctcctgtgagcggctcggcgtgtgcgtttgtgaacctcagagtgtcgctcaaagataaa
cagcaggacggtgtggttctgctggagaaccccaagggagacaacagactggacctggag
cagctgaagaggatctgctgcagtgtgttcggcctcaacggagctccagtctccatattc
aacggcaagacagcactcagcagcagcactgatctgctgtctctgagcggcaggactctg
actgtgagctcggctgcgggttcgagtcctgcagatgtgagcagctccgagtctctgctg
tgtccgtatgtgaacctgcagctcgtcaacgccagtcctgcagagtgtcggactggagac
gtggcgacgctgctcctgatgaaccctgagggtaaaaacctcctccagttctcagatctg
ctgagagaaacggctaaagtgttcggtctgagaggaagaagactgatgctctacactgat
ccacagctcactgcagagctgaaggcgtcctctatgaagactctgaactcgaagacgctc
tacgtgaaggttcttccaacaacagcagaagcgtaa
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integrated database retrieval system
