Danio rerio (zebrafish): 378480
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Entry
378480 CDS
T01004
Symbol
pdgfaa
Name
(RefSeq) platelet-derived growth factor alpha polypeptide a precursor
KO
K04359
platelet-derived growth factor subunit A
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04010
MAPK signaling pathway
dre04020
Calcium signaling pathway
dre04510
Focal adhesion
dre04540
Gap junction
dre04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
378480 (pdgfaa)
04020 Calcium signaling pathway
378480 (pdgfaa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
378480 (pdgfaa)
04540 Gap junction
378480 (pdgfaa)
09142 Cell motility
04810 Regulation of actin cytoskeleton
378480 (pdgfaa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
dre04052
]
378480 (pdgfaa)
00536 Glycosaminoglycan binding proteins [BR:
dre00536
]
378480 (pdgfaa)
Cytokines and neuropeptides [BR:
dre04052
]
Cytokines
Growth factors (RTK binding)
378480 (pdgfaa)
Glycosaminoglycan binding proteins [BR:
dre00536
]
Heparan sulfate / Heparin
Growth factors/receptors
378480 (pdgfaa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
DUF3562
Motif
Other DBs
NCBI-GeneID:
378480
NCBI-ProteinID:
NP_919407
ZFIN:
ZDB-GENE-030918-2
Ensembl:
ENSDARG00000110069
UniProt:
A5PMP7
LinkDB
All DBs
Position
22:complement(26757267..26772311)
Genome browser
AA seq
194 aa
AA seq
DB search
MRTALIHFLVCCFSLLSAAAEEAPIPRELIERLSNSEIHSISDLQRILEMDFLENEVLED
VKQGHHKEHLYDSRNLKNLHSRRKRSIEEAVPAVCKTRTVIYEIPRSQVDPTAANFLIWP
PCVEVRRCSGCCNTSNMRCHPSKKHHRNVKVAKVEYVRRRPKLREVQVQLEDHLECVCTS
RHHSESRIHTADIR
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccgcgctgatccactttctcgtctgctgcttctctctgctttcagcagccgct
gaggaagcaccaattccccgagagctgattgagagactctctaacagtgagatccacagc
atcagcgacctccagaggatcctggaaatggacttcctagagaatgaagtgctggaggat
gttaaacaaggccaccataaggagcatctgtacgacagcagaaacctcaagaacttgcac
tccagacgcaagagaagcattgaggaggcagtgccagccgtctgtaagacccgtacggtg
atctatgagatcccacgaagtcaggtggatccaacagccgccaacttcttgatctggcct
ccgtgtgtggaggtgaggcgatgctcaggctgctgcaacaccagcaacatgcgctgccac
ccgtccaaaaaacaccacaggaacgtgaaggtggcgaaggtagagtatgttcgaaggagg
ccgaagctgcgggaggtgcaggtgcagctggaggatcatctggagtgtgtttgcacgtcc
agacatcactcagagtcccgcatacacacagcagatataaggtga
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