Danio rerio (zebrafish): 387529
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Entry
387529 CDS
T01004
Symbol
ldlra
Name
(RefSeq) low density lipoprotein receptor a precursor
KO
K12473
low-density lipoprotein receptor
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03272
Virion - Hepatitis viruses
dre04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
387529 (ldlra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
387529 (ldlra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
387529 (ldlra)
Membrane trafficking [BR:
dre04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
387529 (ldlra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Motif
Other DBs
NCBI-GeneID:
387529
NCBI-ProteinID:
NP_001025454
ZFIN:
ZDB-GENE-031217-1
Ensembl:
ENSDARG00000029476
UniProt:
Q7ZZT0
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All DBs
Position
3:19299135..19323698
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AA seq
911 aa
AA seq
DB search
MEISFMLLLAVTLFCPVQSGALTCDSRQYQCGNGKCITARWVCDETDDCGDGTDELPAAC
LAKTCRPSQFSCGGRLNQCIPKSWKCDGKADCENNADEEGCDPRQCHDGEFRCGSGQCVT
AAFVCDDEIDCEDGSDEVSCPPTTCGSSSFRCNNAQCVPRLWVCDGDADCADNSDELPEK
CGPGTSKPTKNPCTSMEFHCGSGECIHGSWKCDGGADCLDHSDEQNCSLPTCRPDEFQCG
DGSCIHGSRQCNHVYDCKDMSDELGCVNATHCEPPYRFKCRSGECISMEKVCNKQRDCRD
WSDEPLRECDSNECLYNNGGCSHICNDLKIGYECLCPTGFRLVDKRRCEDIDECANPDTC
SQICVNQMGSYKCECEDGYQMDPASKACKAIGTIAYLFFTNRHEVRKMTLDRSEYIRVIP
RLKNVVALDMNIASRDIYWSDLSLKKIYSIRGAISVATADGSRRKTLFKENLAKPRAIVV
DPIKNFMFWTDWGTPAKIEKSGLNGVDRSTLVADDIVWPNGITLDLLTERLYWVDSKLHT
LSSISVQGDGRRTLIIDQGKLAHPLSLTVFEEKVFWTDVSNNAILSANRVTGGDITKVAE
HLSSPEDIVLFHNLKQPTGINWCRINNGGCEFLCLAAPQINRFSPKYTCACPDNMMLARD
MRKCVPAVVTAATPVRPEIPTTIRPQVPSETTPKPARPSTTNSQPLPTPAPKIPNRPTQA
ATLVPSQATTKLPFFTQTDVHFGDVKAVSDTSSSTLWALYIVVPLVPFIIHSGMNHQLIQ
HVFRQRMPFQPQPISRKHPHTLIHTDTDNLAYPIHLYRLTVGETGAPGGSPHEHRENIQT
PHRNTSCGLNQRPSCSLLCLVVGGAALFWRKWRQKNTNSIHFDNPVYQKTTEDQVHLCRN
NSSDGYFYPQV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggagatctcattcatgcttttattggcggttacgttattctgtcccgttcagtcaggt
gccttgacttgtgattcacggcagtatcagtgtggcaatggaaagtgcatcacggcgaga
tgggtgtgtgatgaaactgatgactgtggtgatggcactgatgaacttcctgctgcatgc
ttggccaagacctgcagacccagtcagttcagttgtggtggtcgactaaaccagtgtatt
cccaagagctggaaatgtgacggaaaagcagattgtgagaataatgcggatgaggaaggc
tgcgatcctcggcagtgtcacgatggagaattccgttgtggcagtggtcagtgcgttacg
gctgcattcgtgtgcgatgatgagatagactgtgaagatggcagtgatgaagtctcctgt
cctccaaccacgtgtggctccagctccttcaggtgcaacaacgcccagtgtgtcccacga
ctctgggtgtgcgatggagatgccgactgtgccgacaattcagatgagttgcctgaaaaa
tgtggccctggaacatctaagcccaccaaaaatccctgcacttccatggagttccattgc
ggaagtggggaatgcatacacggtagctggaagtgtgatggaggagcggattgtttggat
cactcggatgagcaaaactgctccttgccaacatgccgtccagatgagttccagtgtggt
gatgggtcttgcatccacggcagtcggcagtgcaaccacgtttatgactgcaaagacatg
agcgatgagctgggctgcgtcaatgcaactcactgtgagccaccatacaggtttaagtgc
cgcagcggtgaatgcataagcatggaaaaggtttgcaacaagcaacgggactgcagggat
tggtctgatgagccgctacgagaatgtgactctaatgagtgtctttacaacaacggtggc
tgctctcatatctgtaatgacctgaagattggttatgagtgcttatgtcctactggcttc
cggttggtggacaagagacgctgtgaagacatcgatgagtgtgccaacccagacacctgc
agccaaatctgtgtcaaccagatgggtagttataagtgtgagtgtgaggatggctaccag
atggacccagccagcaaggcctgcaaagctattggaactatcgcctacctatttttcacc
aatcgccatgaagtaaggaagatgactctggatcgcagtgaatacatacgcgtcatcccc
cgcctgaagaacgttgttgcactagacatgaatattgcttccagagatatctactggtcg
gatttatccctgaaaaaaatatacagcatcaggggcgccatctctgtggcaacagctgac
ggaagcagacgcaagacgctcttcaaagagaacctggccaaaccacgtgccattgttgtc
gacccaattaaaaacttcatgttctggaccgattggggcacaccagccaagatcgaaaaa
agtggtcttaatggagttgaccggagcactctagttgcggacgacattgtgtggcccaat
ggaataaccctagacctattgaccgagcgtctgtactgggttgactccaaactccatact
ctttccagcatcagtgtgcagggagatggtcggcgtactctaatcattgaccaaggcaaa
cttgcgcaccctctgagtctcactgtttttgaggagaaagtgttttggacggatgtaagc
aataacgccattttaagtgcgaaccgcgtcaccggaggagacatcacaaaagtggccgaa
cacctctcatctccagaggacattgttcttttccacaacctcaaacaacctactggaatc
aactggtgcaggatcaataacggtggctgtgagttcttgtgccttgctgcccctcagatt
aacagattctcacccaaatacacatgtgcctgtccagataatatgatgttggccagagat
atgcggaaatgtgtaccagctgtagtgacagctgcaactcctgtcaggcctgaaataccc
acaaccattcgtcctcaagttccttcagaaacgacaccaaaacctgctaggccttccact
accaattcacaacctttacctactccggctcccaagatccctaacagacccactcaagct
gccactttggtgccttcacaggccacaactaaacttccctttttcacccagacagatgtc
cactttggtgatgttaaggctgtctctgatacgtcatcttccacactgtgggccttgtat
attgtggttcctcttgtcccttttataatccacagcggaatgaaccaccaacttatccag
cacgtttttagacagcggatgcccttccagccacaacccatctctaggaaacatccacat
acactcattcacactgatacggacaatttagcttacccaattcacctgtaccgcctgact
gtgggggaaaccggagcacccggaggaagcccacacgaacacagggagaacattcaaact
ccacacagaaacaccagctgtggcttgaaccagcgaccttcttgctcactcctctgtttg
gttgtgggtggcgctgcactgttttggagaaaatggcgtcagaaaaataccaacagcatc
cactttgacaacccggtttatcagaagaccacagaggaccaggtgcatttatgcagaaac
aacagttctgatggctatttttaccctcaggtatga
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