KEGG   Danio rerio (zebrafish): 387529
Entry
387529            CDS       T01004                                 
Symbol
ldlra
Name
(RefSeq) low density lipoprotein receptor a precursor
  KO
K12473  low-density lipoprotein receptor
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    387529 (ldlra)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    387529 (ldlra)
Membrane trafficking [BR:dre04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Low-density lipoprotein receptor (LDLR) family proteins
    387529 (ldlra)
SSDB
Motif
Pfam: Ldl_recept_a Ldl_recept_b FXa_inhibition cEGF EGF_CA SGL
Other DBs
NCBI-GeneID: 387529
NCBI-ProteinID: NP_001025454
ZFIN: ZDB-GENE-031217-1
Ensembl: ENSDARG00000029476
UniProt: Q7ZZT0
LinkDB
Position
3:19299136..19323698
AA seq 911 aa
MEISFMLLLAVTLFCPVQSGALTCDSRQYQCGNGKCITARWVCDETDDCGDGTDELPAAC
LAKTCRPSQFSCGGRLNQCIPKSWKCDGKADCENNADEEGCDPRQCHDGEFRCGSGQCVT
AAFVCDDEIDCEDGSDEVSCPPTTCGSSSFRCNNAQCVPRLWVCDGDADCADNSDELPEK
CGPGTSKPTKNPCTSMEFHCGSGECIHGSWKCDGGADCLDHSDEQNCSLPTCRPDEFQCG
DGSCIHGSRQCNHVYDCKDMSDELGCVNATHCEPPYRFKCRSGECISMEKVCNKQRDCRD
WSDEPLRECDSNECLYNNGGCSHICNDLKIGYECLCPTGFRLVDKRRCEDIDECANPDTC
SQICVNQMGSYKCECEDGYQMDPASKACKAIGTIAYLFFTNRHEVRKMTLDRSEYIRVIP
RLKNVVALDMNIASRDIYWSDLSLKKIYSIRGAISVATADGSRRKTLFKENLAKPRAIVV
DPIKNFMFWTDWGTPAKIEKSGLNGVDRSTLVADDIVWPNGITLDLLTERLYWVDSKLHT
LSSISVQGDGRRTLIIDQGKLAHPLSLTVFEEKVFWTDVSNNAILSANRVTGGDITKVAE
HLSSPEDIVLFHNLKQPTGINWCRINNGGCEFLCLAAPQINRFSPKYTCACPDNMMLARD
MRKCVPAVVTAATPVRPEIPTTIRPQVPSETTPKPARPSTTNSQPLPTPAPKIPNRPTQA
ATLVPSQATTKLPFFTQTDVHFGDVKAVSDTSSSTLWALYIVVPLVPFIIHSGMNHQLIQ
HVFRQRMPFQPQPISRKHPHTLIHTDTDNLAYPIHLYRLTVGETGAPGGSPHEHRENIQT
PHRNTSCGLNQRPSCSLLCLVVGGAALFWRKWRQKNTNSIHFDNPVYQKTTEDQVHLCRN
NSSDGYFYPQV
NT seq 2736 nt   +upstreamnt  +downstreamnt
atggagatctcattcatgcttttattggcggttacgttattctgtcccgttcagtcaggt
gccttgacttgtgattcacggcagtatcagtgtggcaatggaaagtgcatcacggcgaga
tgggtgtgtgatgaaactgatgactgtggtgatggcactgatgaacttcctgctgcatgc
ttggccaagacctgcagacccagtcagttcagttgtggtggtcgactaaaccagtgtatt
cccaagagctggaaatgtgacggaaaagcagattgtgagaataatgcggatgaggaaggc
tgcgatcctcggcagtgtcacgatggagaattccgttgtggcagtggtcagtgcgttacg
gctgcattcgtgtgcgatgatgagatagactgtgaagatggcagtgatgaagtctcctgt
cctccaaccacgtgtggctccagctccttcaggtgcaacaacgcccagtgtgtcccacga
ctctgggtgtgcgatggagatgccgactgtgccgacaattcagatgagttgcctgaaaaa
tgtggccctggaacatctaagcccaccaaaaatccctgcacttccatggagttccattgc
ggaagtggggaatgcatacacggtagctggaagtgtgatggaggagcggattgtttggat
cactcggatgagcaaaactgctccttgccaacatgccgtccagatgagttccagtgtggt
gatgggtcttgcatccacggcagtcggcagtgcaaccacgtttatgactgcaaagacatg
agcgatgagctgggctgcgtcaatgcaactcactgtgagccaccatacaggtttaagtgc
cgcagcggtgaatgcataagcatggaaaaggtttgcaacaagcaacgggactgcagggat
tggtctgatgagccgctacgagaatgtgactctaatgagtgtctttacaacaacggtggc
tgctctcatatctgtaatgacctgaagattggttatgagtgcttatgtcctactggcttc
cggttggtggacaagagacgctgtgaagacatcgatgagtgtgccaacccagacacctgc
agccaaatctgtgtcaaccagatgggtagttataagtgtgagtgtgaggatggctaccag
atggacccagccagcaaggcctgcaaagctattggaactatcgcctacctatttttcacc
aatcgccatgaagtaaggaagatgactctggatcgcagtgaatacatacgcgtcatcccc
cgcctgaagaacgttgttgcactagacatgaatattgcttccagagatatctactggtcg
gatttatccctgaaaaaaatatacagcatcaggggcgccatctctgtggcaacagctgac
ggaagcagacgcaagacgctcttcaaagagaacctggccaaaccacgtgccattgttgtc
gacccaattaaaaacttcatgttctggaccgattggggcacaccagccaagatcgaaaaa
agtggtcttaatggagttgaccggagcactctagttgcggacgacattgtgtggcccaat
ggaataaccctagacctattgaccgagcgtctgtactgggttgactccaaactccatact
ctttccagcatcagtgtgcagggagatggtcggcgtactctaatcattgaccaaggcaaa
cttgcgcaccctctgagtctcactgtttttgaggagaaagtgttttggacggatgtaagc
aataacgccattttaagtgcgaaccgcgtcaccggaggagacatcacaaaagtggccgaa
cacctctcatctccagaggacattgttcttttccacaacctcaaacaacctactggaatc
aactggtgcaggatcaataacggtggctgtgagttcttgtgccttgctgcccctcagatt
aacagattctcacccaaatacacatgtgcctgtccagataatatgatgttggccagagat
atgcggaaatgtgtaccagctgtagtgacagctgcaactcctgtcaggcctgaaataccc
acaaccattcgtcctcaagttccttcagaaacgacaccaaaacctgctaggccttccact
accaattcacaacctttacctactccggctcccaagatccctaacagacccactcaagct
gccactttggtgccttcacaggccacaactaaacttccctttttcacccagacagatgtc
cactttggtgatgttaaggctgtctctgatacgtcatcttccacactgtgggccttgtat
attgtggttcctcttgtcccttttataatccacagcggaatgaaccaccaacttatccag
cacgtttttagacagcggatgcccttccagccacaacccatctctaggaaacatccacat
acactcattcacactgatacggacaatttagcttacccaattcacctgtaccgcctgact
gtgggggaaaccggagcacccggaggaagcccacacgaacacagggagaacattcaaact
ccacacagaaacaccagctgtggcttgaaccagcgaccttcttgctcactcctctgtttg
gttgtgggtggcgctgcactgttttggagaaaatggcgtcagaaaaataccaacagcatc
cactttgacaacccggtttatcagaagaccacagaggaccaggtgcatttatgcagaaac
aacagttctgatggctatttttaccctcaggtatga

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