Danio rerio (zebrafish): 394060
Help
Entry
394060 CDS
T01004
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00280
Valine, leucine and isoleucine degradation
dre00650
Butanoate metabolism
dre00900
Terpenoid backbone biosynthesis
dre01100
Metabolic pathways
dre03320
PPAR signaling pathway
Module
dre_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
394060 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
394060 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
394060 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
394060 (hmgcs1)
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
394060 (hmgcs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
394060
NCBI-ProteinID:
NP_957379
ZFIN:
ZDB-GENE-040426-1042
Ensembl:
ENSDARG00000103025
UniProt:
A0A8M1PIL7
LinkDB
All DBs
Position
10:6010652..6034410
Genome browser
AA seq
526 aa
AA seq
DB search
MIVSPFRMPGSLPAICESMWPKDVGIIAMEVYVPSQYVDQAELEEYDGVGAGKYTVGLGQ
ARMGFCSDREDINSLCLTVVQRLMERNGLSYESVGRLEVGTETIIDKSKSTKTVLMQLFE
ESGNTDVEGVDTTNACYGGTAALFNAVNWVESSSWDGRYALVVAGDIAVYATGSARPTGG
AGAVAMLVGPNAPLAFERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDQCY
SVYKNKIHARWQREGTEGRCSLEDFGFMVFHSPYCKLVQKSLARLMLNDFLCHPSPNMES
GPFSGLEAFRDVKIEDTYFDRDVEKAFMKASSELFDDKTKASLLISNQNGNMYTPSVYGC
LASVLAQHTPQQLAGQRIGVFSYGSGFAATLYSIKVTQDGTPGSALDKLVSSLCDLPARL
DSRQKVSPGVFAETMKLREETHHLANYIPQGSVDELFPGTWYLTRVDEKHRRQYARRSMN
DDRPLEAGLVSSSMAAEHIPSPLKKMPRIPTTTAGPEVVVMSNGDH
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaagtccattcagaatgcctggatcactccctgcgatttgcgagtccatgtgg
cccaaagatgtgggaatcatcgctatggaggtgtatgtcccatctcagtacgttgaccaa
gcagagctggaggagtatgatggagtcggggccggaaagtacactgttggtctgggacag
gcgcgcatgggattctgctcggaccgcgaggacatcaactctctgtgcttgacagtggtg
cagaggttaatggagaggaacggcctctcgtacgagagcgtgggccggctggaggtgggc
acagaaaccatcatcgacaagtccaaatccaccaagactgtcctgatgcagctgtttgaa
gagtcgggcaacactgatgtggagggagtggacaccactaacgcctgctatgggggtacc
gctgcactcttcaatgccgtcaactgggtggagtccagctcatgggacggtcgttacgct
ctggttgttgctggtgatattgctgtgtatgccacgggcagcgccaggcctacaggggga
gccggagctgtggccatgttggttggaccaaatgcccctctggccttcgagagagggctt
cgtgggacacatatgcaacatgcgtatgatttttataagccggacatggtgtcggagtat
ccagtggtggatggcaagctttccatccagtgttacctcagtgctttagatcaatgctac
tccgtctacaagaacaagatccatgcccgctggcaaagagaggggactgaagggcgttgt
agtcttgaagactttggcttcatggtgttccactctccttactgtaaactggtccagaag
tctttggctcgtctaatgctcaacgatttcctctgtcatcccagtccaaacatggaaagc
ggcccatttagcggactggaagctttcagagatgtaaagattgaggacacttattttgac
agagatgtggagaaggcctttatgaaagccagttctgaactgtttgatgacaaaacaaag
gcatctctccttatatcaaaccagaatggcaacatgtacaccccctcagtgtacggctgc
ttggcttcagttcttgcacagcacacaccacagcagttagcaggacagagaattggtgtg
ttttcttatggctcgggcttcgctgctacactttactccatcaaagtcactcaagatggc
acacctggctctgctctggataagttggtctccagcttgtgtgacttgccggccagactg
gactctaggcagaaggtttcaccgggtgtttttgctgagacaatgaagctcagagaagaa
acccaccatttagcaaactacatccctcaaggctcagtagatgagcttttcccgggaaca
tggtacctcactcgtgtggacgagaagcatcgcagacagtatgccagacgatccatgaat
gatgacagacccctggaggccggactggtcagttccagcatggcagctgagcatattccc
agtccgctcaagaagatgccccgtatccccactaccacagctggccctgaggtggtcgtc
atgagcaacggggatcattaa
DBGET
integrated database retrieval system
