Danio rerio (zebrafish): 402895
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Entry
402895 CDS
T01004
Symbol
zgc:100846
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
402895 (zgc:100846)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
402895 (zgc:100846)
Membrane trafficking [BR:
dre04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
402895 (zgc:100846)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
402895
NCBI-ProteinID:
NP_991166
ZFIN:
ZDB-GENE-040801-47
Ensembl:
ENSDARG00000011837
UniProt:
Q6TLH8
LinkDB
All DBs
Position
13:12761770..12778286
Genome browser
AA seq
462 aa
AA seq
DB search
MSSACPPQSPAVAKTEVLVDDCCPVLAATFAYWDNILGPRVRHIWAPKSQGLLLLSDGEV
TFLANHTLNGEILRSAESGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQS
ELSFYLPLHAVCVERLKHVIRKGRICMQKGYNIISMLSSEIVPIMELLTSMKKHSVPEEV
DLKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSMVVGSNPEKVNKIVLTLCLFLTPAE
RKCSRLCHPDGSFKYDTGLFVQGLLKDSTGSFVFPYRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYHQRRYMRAELSALWKAASEDDFSSDNLINAQDSYTPDLNIFQDVMHKDTLVKS
FIDEVFLLKPGLSLRSVYLSHFLLLLHRKALTLLRYIEDETQKGKKPFRSLRNLKTDLDL
TVEGDLNIIMAMAEKLRAGLHSFVFGKSFLTSVQERDLLINF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagcctgtcctccacaatctccagccgtggccaagactgaagttctggttgac
gactgttgtcctgttctggctgcgaccttcgcttactgggacaacatcctcggacctcgt
gtccggcacatctgggcaccgaaaagccaagggttgctgctgctcagtgacggagaggtc
acatttctggccaatcacacgctgaacggtgagattttgcgcagcgcagagagcggcgcg
gtggatgtcaagttcttcgtcttggctgaaaagggagtcatcatcgtctctctgatattt
gacggagaactcaagggtgataagaacacttgcgcgctgtcaatcatcttgccgcagtca
gagcttagcttctacctgcctctgcacgccgtatgtgtggagagactcaaacatgtcatc
cgcaagggacgcatctgcatgcagaagggttacaacataatctctatgttgtcatctgag
attgttcctataatggagcttctcacttctatgaagaaacacagtgtgccagaggaggtt
gatctaaaggacactgtgctcaacgacgatgatattggagacagctgtcatgaagacttt
ttgcacaaggccatcagctctcatcttcagacttgcggctgttccatggtggttggcagc
aatcctgagaaagtcaataagattgtgctcacgctgtgcctcttcctcactcctgcggag
agaaagtgctctagactgtgtcatccagacggctcctttaaatatgacaccggcctgttt
gtgcagggcctccttaaggactccaccggcagttttgtgtttccctaccggcaggtgctc
tactcgccgtatcccaccacccacatcgacgtggacattaacacagtgaagcagatgcca
ccctgccacgagcacacgtatcatcagcggcgctacatgcgtgcggagctcagtgccctc
tggaaggcggccagcgaggatgacttcagttcagacaacctcatcaatgcccaggactcc
tacacaccagacctgaatatatttcaggacgtgatgcacaaagacacgcttgtgaagtct
ttcatagatgaggtgtttctgttgaaaccaggtctgtctctgcgtagtgtgtatttgtcc
cacttccttctcctgttgcacaggaaggccctgacgctgctcagatacattgaggatgag
acgcagaaggggaagaagcctttcagatctctgcgcaatctgaaaaccgatttggacctg
acggtggagggcgacttgaatatcatcatggcgatggcggagaagctgcgggccggcctt
cactcttttgttttcgggaagtctttcctgaccagcgtgcaggagcgcgaccttctcatc
aacttctga
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integrated database retrieval system
