KEGG   Danio rerio (zebrafish): 405785
Entry
405785            CDS       T01004                                 
Symbol
tnfa
Name
(RefSeq) tumor necrosis factor a (TNF superfamily, member 2)
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04010  MAPK signaling pathway
dre04060  Cytokine-cytokine receptor interaction
dre04150  mTOR signaling pathway
dre04210  Apoptosis
dre04217  Necroptosis
dre04350  TGF-beta signaling pathway
dre04620  Toll-like receptor signaling pathway
dre04621  NOD-like receptor signaling pathway
dre04622  RIG-I-like receptor signaling pathway
dre04625  C-type lectin receptor signaling pathway
dre04920  Adipocytokine signaling pathway
dre05132  Salmonella infection
dre05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    405785 (tnfa)
   04350 TGF-beta signaling pathway
    405785 (tnfa)
   04150 mTOR signaling pathway
    405785 (tnfa)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    405785 (tnfa)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    405785 (tnfa)
   04217 Necroptosis
    405785 (tnfa)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    405785 (tnfa)
   04621 NOD-like receptor signaling pathway
    405785 (tnfa)
   04622 RIG-I-like receptor signaling pathway
    405785 (tnfa)
   04625 C-type lectin receptor signaling pathway
    405785 (tnfa)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    405785 (tnfa)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    405785 (tnfa)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    405785 (tnfa)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:dre04052]
    405785 (tnfa)
   00536 Glycosaminoglycan binding proteins [BR:dre00536]
    405785 (tnfa)
Cytokines and neuropeptides [BR:dre04052]
 Cytokines
  Tumor necrosis fators
   405785 (tnfa)
Glycosaminoglycan binding proteins [BR:dre00536]
 Heparan sulfate / Heparin
  Cytokines
   405785 (tnfa)
SSDB
Motif
Pfam: TNF PDR_CDR
Other DBs
NCBI-GeneID: 405785
NCBI-ProteinID: NP_998024
ZFIN: ZDB-GENE-050317-1
Ensembl: ENSDARG00000009511
UniProt: Q08CQ3
LinkDB
Position
19:27019432..27024013
AA seq 234 aa
MKLESRALLDVEEGELPLPLVMVSRRKAGSSKSGVWRVFGIILAVGLCAAAAVCFTLHKT
QGNQQDGSVLRLTLRDRISQGNFTSKAAIHLTGGYNSESKTLDWRDDQDQAFSSGGLKLV
NREIIIPDDGIYFVYSQVSLHISCTSELTEEQVLMSHAVMRFSESYGGKKPLFSAIRSIC
TQEPESENLWYNTIYLGAAFHLREGDRLGTDTTTALLPMVENDNGKTFFGVFGL
NT seq 705 nt   +upstreamnt  +downstreamnt
atgaagcttgagagtcgggcgcttttggatgttgaagaaggagagttgcctttaccgctg
gtgatggtgtctaggaggaaagctggatcttcaaagtcgggtgtatggagggtgtttggg
atcattttggctgtgggcctttgtgccgctgctgccgtctgcttcacgctccataagacc
cagggcaatcaacaagatggaagtgtgctgagactcacattgagagatcgcatttcacaa
ggcaatttcacttccaaggctgccatccatttaacaggtggatacaactctgaatcaaag
accttagactggagagatgaccaggaccaggccttttcttcaggtggcttgaaattagta
aacagggagattatcattcccgatgatggcatttattttgtctacagccaggtgtctttg
cacatcagctgcacgtctgaactgactgaggaacaagtgcttatgagccatgcagtgatg
cgcttttctgaatcctacggaggcaaaaagccacttttcagtgcaatccgctcaatctgc
acgcaggagcctgaatctgaaaatctgtggtacaacactatttacctcggcgctgccttc
catttacgagaaggagacagactgggcacagacacgaccacagcacttctaccgatggtt
gaaaatgataacggaaagaccttctttggggtgtttggtttgtga

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