KEGG   Danio rerio (zebrafish): 405790
Entry
405790            CDS       T01004                                 
Symbol
ifng1
Name
(RefSeq) interferon gamma 1 precursor
  KO
K04687  interferon gamma
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03050  Proteasome
dre04060  Cytokine-cytokine receptor interaction
dre04217  Necroptosis
dre04350  TGF-beta signaling pathway
dre05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    405790 (ifng1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    405790 (ifng1)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    405790 (ifng1)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    405790 (ifng1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    405790 (ifng1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:dre03051]
    405790 (ifng1)
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:dre04052]
    405790 (ifng1)
   00536 Glycosaminoglycan binding proteins [BR:dre00536]
    405790 (ifng1)
Proteasome [BR:dre03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    405790 (ifng1)
Cytokines and neuropeptides [BR:dre04052]
 Cytokines
  Interferons
   405790 (ifng1)
Glycosaminoglycan binding proteins [BR:dre00536]
 Heparan sulfate / Heparin
  Cytokines
   405790 (ifng1)
SSDB
Motif
Pfam: IFN-gamma CENP-M
Other DBs
NCBI-GeneID: 405790
NCBI-ProteinID: NP_998029
ZFIN: ZDB-GENE-040629-1
Ensembl: ENSDARG00000024211
UniProt: Q75S22
LinkDB
Position
4:complement(14083616..14086062)
AA seq 185 aa
MIAQHMMGFAWGVCLLFSGWMTYSEASVPENLDKSIEELKAYYIKEDSQLHNAHPIFLRI
LKDLKVNLEESEQNLLMSIVMDTYSRIFTRMQNDSVDEATKERLAHVQEHLKKLQESYFP
GKSAELRTYAETLWAIKENDPIVQRKALFELKRVYREATLLKNLKNKERKRRQAKASRSK
SLNRG
NT seq 558 nt   +upstreamnt  +downstreamnt
atgattgcgcaacacatgatgggctttgcctggggagtatgtttgctgttttcgggatgg
atgacatacagtgaagccagtgtgcccgagaacctagacaagagcatcgaagagctcaaa
gcttactatattaaagaagattctcagctacataatgcacaccccatcttcctgcgaatc
ctgaaagatttaaaggtgaatcttgaggaaagtgagcagaatctactgatgagcattgta
atggacacatacagtaggatattcactcgcatgcagaatgacagcgtggatgaagctaca
aaggagaggctggcacatgttcaagagcatttgaaaaagctgcaagaaagctactttcca
ggcaagagtgcagagctcaggacgtatgcagaaacgctatgggcgatcaaggaaaacgac
ccgatcgtccagcgaaaggctttgtttgagctgaagcgtgtctatagagaagcaacactc
ctgaaaaacttaaagaataaagaacgcaagagacggcaggctaaagcatcaagaagcaaa
agtctaaatagaggttga

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