Danio rerio (zebrafish): 414848
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Entry
414848 CDS
T01004
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00514
Other types of O-glycan biosynthesis
dre04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
414848 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
414848 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dre01003
]
414848 (rfng)
Enzymes [BR:
dre01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
414848 (rfng)
Glycosyltransferases [BR:
dre01003
]
Glycan extension
O-Glycan
414848 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
414848
NCBI-ProteinID:
NP_001001830
ZFIN:
ZDB-GENE-030131-5418
Ensembl:
ENSDARG00000019746
UniProt:
F1QXC7
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All DBs
Position
12:complement(3058989..3077395)
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AA seq
362 aa
AA seq
DB search
MHLSHVGSNKTCFLLSLAFCALLVLLIPSLQPPQRQADLPQPRPHAKPAKHPLKNSLYRP
NEDTRGGSFTQTTPPENLQKMDDLNSHYRDFLDLRDIFIAVKTTRKYHKSRLQLLSQTWV
SRAKEQTFIFTDGEDKELRLKAGLNIINTNCSAAHTRQALCCKMSVEYDKFIESQKKWFC
HVDDDNYVILPSLLELLSSYSHTQDVYLGRPSLDHPIEAAERVKSDGSVSVKFWFATGGA
GFCISRGLALKMSPWASLGNFITTAEKIRLPDDCTIGYIIEALLEVPLTHTGLFHSHLEN
LQRLPAENILRQVTLSYGGFENRRNVVSVGGAFSLAEDPTRFKTVHCKLYPDTEWCPRKT
RH
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgcacttatcccatgtcggctccaacaaaacctgctttctgctttccctcgcattctgt
gccctgctggtgctgcttattccctccttacaacctccacagcgtcaggcggatctgcct
cagccgcggccccatgccaaacccgccaaacacccactcaaaaactctctctacagacca
aatgaagacaccaggggtggtagttttactcaaacaactccacctgagaacctgcagaag
atggacgatctaaactcgcactacagagacttcctggacttaagagacatttttattgct
gtgaagaccactaggaagtatcacaagtccagattgcagctcctgtcccagacctgggtg
tccagagcgaaggagcagacgtttatcttcactgatggggaggacaaggagctccggctg
aaagcagggctgaacatcatcaacaccaactgctcggcggctcacacacgccaagccctg
tgctgcaagatgtctgtggagtatgacaagttcatcgagtcacagaaaaagtggttttgt
catgtggatgatgataactatgtgatcctgcccagtctactggagcttctgtcctcgtac
tctcacacacaggatgtgtatctgggccggcctagcctggatcatcctatagaggctgca
gagagagtcaagagcgacggatcggtgtcagtgaagttctggtttgccactggtggagct
ggtttctgcatcagtcgaggtttagcgctcaaaatgagtccatgggccagtcttggaaac
tttatcacaacagcagagaagatccgtctgccagatgactgtacaattggctacatcatc
gaggcgctgctggaggttcctctcacccacacaggcctgtttcactcacacctggagaac
ctgcagagactgcctgcagaaaacatcctgcgacaggtgaccctcagttatggtggattc
gagaacaggaggaatgtggtcagtgttggaggagcgttttcattggctgaagacccaaca
cggtttaaaacggttcactgcaagctctacccagacaccgagtggtgcccacgcaagact
cgccattga
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