Danio rerio (zebrafish): 449846
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Entry
449846 CDS
T01004
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03420
Nucleotide excision repair
dre04110
Cell cycle
dre04114
Oocyte meiosis
dre04120
Ubiquitin mediated proteolysis
dre04141
Protein processing in endoplasmic reticulum
dre04310
Wnt signaling pathway
dre04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
449846 (rbx1)
04120 Ubiquitin mediated proteolysis
449846 (rbx1)
09124 Replication and repair
03420 Nucleotide excision repair
449846 (rbx1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
449846 (rbx1)
04350 TGF-beta signaling pathway
449846 (rbx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
449846 (rbx1)
03400 DNA repair and recombination proteins [BR:
dre03400
]
449846 (rbx1)
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
449846 (rbx1)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
449846 (rbx1)
Multi subunit type E3
SCF complex
Ring finger protein
449846 (rbx1)
Cul2 complex
449846 (rbx1)
Cul3 complex
449846 (rbx1)
Cul4 complex
449846 (rbx1)
Cul7 complex
449846 (rbx1)
Cul8 complex
449846 (rbx1)
Cul9 complex
449846 (rbx1)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
449846 (rbx1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
449846 (rbx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
449846
NCBI-ProteinID:
NP_001077013
ZFIN:
ZDB-GENE-041008-106
Ensembl:
ENSDARG00000038030
UniProt:
A4FUL3
LinkDB
All DBs
Position
3:complement(25101960..25107802)
Genome browser
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPSGANSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgatggatgtggacaccccaagtggagctaacagcggagccagtaaaaag
cgatttgaagtgaaaaagtggaacgctgtggctctgtgggcatgggacattgtagtggac
aactgtgccatctgcagaaatcacattatggacctctgtattgagtgtcaggccaatcag
gcgtctgccacctcagaggagtgtacggtggcctggggagtctgcaatcacgcttttcat
ttccactgcatctcccgctggctgaagaccagacaagtgtgtccactggacaacagagag
tgggagtttcagaagtatggtcattag
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