Danio rerio (zebrafish): 503572
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Entry
503572 CDS
T01004
Symbol
pcdh1gc6
Name
(RefSeq) protocadherin 1 gamma c 6 precursor
KO
K16497
protocadherin gamma subfamily C
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dre04515
]
503572 (pcdh1gc6)
Cell adhesion molecules [BR:
dre04515
]
Cadherins
Protocadherins
503572 (pcdh1gc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_FAT4_N
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
503572
NCBI-ProteinID:
NP_001012675
ZFIN:
ZDB-GENE-041118-17
Ensembl:
ENSDARG00000103950
UniProt:
A0A8M1N4C9
I6LC17
LinkDB
All DBs
Position
10:26642043..26668733
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AA seq
948 aa
AA seq
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MKRIGKWELAALWLYALSLLWSTVGAQIRYTIPEELKEGSIVGNIAKDLGFDISDIAERK
LRIASESNRQYFSVDSGKGDLVVNGRIDRETLCGQSASCLMPLQIVIENPLQLHRVEIEI
QDINDNPPTFHTKDVILKISELVAPGTRFSLESAEDLDVSSNSLKTYTLNNNDFFRLNVK
TLKNGRKVPELVVEKALDREKQSIHELILTALDGGNPVKSGTSLLQIIVQDINDNEPKFE
VASYKASVVEKATFDLSVLKIKATDPDEGLNGEIEYLFAAHTPESVRNVFRVNVETGEIK
VIGGLDYETKKSYTFDVCAKDKGNPELEGQSSVQIDIIDENDNPPEIILTSLPSPVPENA
TVGTVVALINVKDLDSGNNGKVELTISTGAPFKIITSFENHYSLITDSFLDRELNSEYNI
EILARDLGVPSLITTKAVNVKVLDVNDNSPVFSQSSYNVYINENNLAGFSLFSVSATDSD
QDKNAMLTYSVLDLSPNHVPASSYFYINSENGTIYSMSSFDYEKMKLISIVVQAKDQGSP
SLSSNATVHVFILDQNDNAPAVIYPSTSMGSVSHQRMPRFAKAGHLVTKVTAVDADSGHN
AWLFYRLAEATDASLFSVNLHTGEVRTKRAVSEHDDSSQRLVLEIKDNGDPIQSTTVTVD
ILIEDGFHEPVSDYREKTNEPSKKTGKITLYLIISLASVSLLCLMTFFILLVKCARGSRG
GTSCCIRRTNSDYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFGSYLSPMSEFSDL
TLIKPSSTTNFTDTLNTLDASLPDSAWTFESQQQKPPNTDWRFPPNQRPGPSGAGARPEE
AGAGAGVIAGTGPWPNPPTEAEQLQAMMAAANASEATATLGPRYNLQYGPDYRQNVYIPG
STATLTANPQQQVLQQALPPPQALPPTEAPKAAQTPASKKKPTKKDKK
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggatcgggaaatgggaattagcagcgctatggctgtacgctctctctctattg
tggagtacagttggagctcagattcgctacacaataccagaagagttaaaggaaggatct
attgttgggaatatcgccaaggatcttggttttgacatctcagatatcgccgagcgtaag
ttacggatagcatctgagtcgaatagacaatatttcagtgtggattcagggaagggggat
ctggtagtaaatggaagaatagacagagagacactctgtggacaaagcgccagttgtctg
atgccactgcaaatcgttatagagaatcctttacagttgcatagagtagaaatagaaata
caagacataaatgacaatccaccaactttccatacgaaagatgttatattaaaaatatct
gaactggttgctccagggacacgattttctcttgaaagtgccgaagacctcgacgtcagc
agtaatagcttaaagacgtacacattgaacaataacgatttcttccgtcttaatgtaaaa
acacttaaaaacggaagaaaggtaccagaactagtcgttgaaaaagctttagacagagag
aaacaatctattcataaattaattttaacagcgttagatggtggtaatccggtaaaatct
ggtacatctttattgcaaataatagttcaagatataaacgacaacgaaccaaaatttgag
gtagcttcatacaaagcgtctgttgtagaaaaagcaacttttgatttaagtgtgcttaaa
ataaaagccacggacccggatgaaggtctaaatggggaaatagagtatttgtttgctgca
cacacgcctgaatctgtaagaaatgtatttagagtgaacgttgaaactggcgaaataaaa
gtcattgggggactagattacgagactaaaaaatcatatacgtttgatgtctgcgctaaa
gacaaagggaatccggagctcgagggacaatcttcagttcagatagatatcatagatgag
aatgacaaccctccagagattatattaacatccttaccgagccctgtgcctgaaaatgcg
acagtgggaactgtggtggctctgattaatgtcaaagatttggactcaggaaataatgga
aaggttgaactaacgatttctacaggcgctccattcaaaataataacatctttcgaaaac
cactactcgttgataactgattcatttttagaccgtgagcttaattctgaatataatatt
gaaatactggccagggatttgggtgttccatctttaataactacaaaggcagtaaatgtt
aaagtgcttgacgtcaatgacaactctccagtattttcacagtcctcgtataatgtttat
ataaacgaaaataatctggcagggttttcgttgttttctgtatctgcgacggatagtgac
caagacaagaatgctatgctcacttattccgttttggatttaagtccaaatcacgttcca
gcatcatcttatttttatattaactctgagaacggaactatttacagcatgagttcattt
gattatgagaaaatgaaactaatcagcattgtagtgcaggctaaagatcaaggctctcca
tctttgagcagcaacgcaactgttcacgtgtttattctggaccagaacgataatgcacct
gctgtcatttacccatccacatccatgggctcagtctctcaccagagaatgccccgtttt
gcaaaagcagggcatctcgttactaaagtaacagcagtggacgcggactcgggtcataac
gcctggctgttctacaggctcgcggaggccacggacgcgtctctgtttagcgtgaattta
catacgggagaagtgaggactaaacgcgctgtttcagagcacgatgactcctctcagaga
ctggtcttagagataaaggataatggagatccgatccagtccaccacagtcacagtggat
atactaatagaggacgggtttcatgagcccgtctcagactacagagagaaaactaatgag
ccaagtaagaaaactggcaaaattacactataccttattatctctttggcttccgtgtct
ttgttgtgtctcatgacgtttttcatcttactggtgaaatgtgcgcgtggcagtagaggc
ggcacaagctgctgtatcaggaggacaaattctgattacaaaaaccccaacagaaacctg
cagatccagctcaacactgacgggcccattaagtatgtggaggttctgggaggagatatg
atgtctcagagtcagtcctttggctcttatctctctccaatgtccgaattcagtgatctc
actctcattaagcccagcagcaccacaaactttacagacacgctaaacacgcttgatgcg
tcattaccagacagcgcgtggacgtttgagagccaacagcaaaagccacctaatactgac
tggcgatttcccccaaaccagaggcctggacccagcggggctggagcacgtcctgaagag
gcaggtgccggtgctggtgtgatagcaggaacaggaccatggcccaacccccctactgag
gctgaacagctccaggctatgatggcagcagcaaacgcaagtgaagccactgcgactctt
ggccctcgctacaatctacagtatggcccggattaccgtcagaacgtctacatcccaggc
agcactgccacccttacagccaaccctcagcaacaggttctccagcaggcccttcctcca
ccacaggcccttccacctaccgaagtccccaaagcggctcaaacaccagccagtaagaag
aaacccacaaagaaagacaagaagtaa
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