Danio rerio (zebrafish): 548341
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Entry
548341 CDS
T01004
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha isoform X1
KO
K08536
liver X receptor alpha
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03320
PPAR signaling pathway
dre04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
548341 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
548341 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
548341 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
dre03310
]
548341 (nr1h3)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
548341 (nr1h3)
Nuclear receptors [BR:
dre03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
548341 (nr1h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
548341
NCBI-ProteinID:
XP_068078392
ZFIN:
ZDB-GENE-050410-7
Ensembl:
ENSDARG00000098439
UniProt:
A0A0R4IVP0
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All DBs
Position
7:complement(34481151..34514043)
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AA seq
441 aa
AA seq
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MSTLSATDITDVGHGDSLGCDSEEGPSAAMAEVKQEILSQTDLYNTSHDDLNDSMLMESN
DIKMFFREDKAAPEGQPVKRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRR
SVIKGAQYSCKNSGRCEMDMYMRRKCQQCRLRKCREAGMLEQCVLSEEQIRLKKMKKQEE
ETARTSTVATPSPAPEMPPLAPEQQEMIEKLVAMQKQCNKRSFIDRPKVTPWPQSQDPQN
REVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQIALLKTSTIEIMLLETSRRY
NPAIDSITFLKDFTYNKEDFAKAGLQLEFINPIFEFSKGMNDLHLDEAEYALLIAINIFS
ADRPNVQDHELVERLQQPYVDALHSYIRIKRPNDHLMFPRMLMKLVSLRTLSSVHSEQVF
ALRLQDKKLPPLLSEIWDVHE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccctttctgcgactgatatcacagatgttggtcatggggactctctgggctgt
gacagtgaagagggcccttcagcagcgatggcagaagtgaaacaggagattctcagtcaa
acggacttgtacaacacatcgcacgatgacctgaacgactccatgctcatggaatccaac
gacatcaagatgttcttccgagaggacaaagctgcgccagagggtcagccagtgaagaga
aagaaaggtcctgcacctaaaatgctggggaatgaggtgtgtagtgtatgtggagacaaa
gcatctggctttcattacaatgtgctgagctgtgagggctgtaaaggtttcttcagacgc
agcgtgatcaagggagcgcagtactcctgcaagaactctggccgctgcgagatggacatg
tacatgcgccgcaagtgtcagcagtgccgcctgcgcaagtgcagggaggcaggcatgttg
gagcaatgtgtgctgtcagaagagcagattcgactaaagaagatgaagaaacaggaagaa
gagacagctcgtacctctacagtggcgacaccgagccctgcacctgagatgcctccgctg
gctcctgaacagcaggagatgatcgaaaagttggtggccatgcagaaacagtgcaacaaa
cgctctttcattgatcggcccaaagtcactccatggccacagagtcaggacccacaaaac
cgagaggttcgacagcagcgctttgctcatttcacagagctggccatcatgtcagtacag
gagattgtagattttgctaaacagctgcccggcttcctggagctcacccgagaagaccag
atcgccctactcaagacctcaaccatagagatcatgctgctagagacttccagacgttat
aacccagcgattgacagcatcacctttcttaaagacttcacttacaataaagaagatttt
gcgaaagcagggctgcagttagagttcatcaaccccatctttgagttttcaaaaggcatg
aatgacctccatctggacgaggcagagtatgctttgctcatcgctatcaacatcttctca
gcagaccgaccaaacgtgcaggatcacgagttagtggaaagactacagcagccatatgtg
gacgccctccactcctacatcagaataaaacgacccaatgatcatctgatgtttcctcgg
atgctgatgaagctggtcagcctacgcactttgagcagcgtccactcagagcaagtgttt
gctctgcgcctccaagacaaaaaacttccacctctactttctgaaatttgggatgttcac
gaatga
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