Danio rerio (zebrafish): 550474
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Entry
550474 CDS
T01004
Symbol
babam2
Name
(RefSeq) BRISC and BRCA1-A complex member 2
KO
K12173
BRCA1-A complex subunit BRE
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
550474 (babam2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
550474 (babam2)
03036 Chromosome and associated proteins [BR:
dre03036
]
550474 (babam2)
03400 DNA repair and recombination proteins [BR:
dre03400
]
550474 (babam2)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
550474 (babam2)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
550474 (babam2)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
550474 (babam2)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
550474 (babam2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
Motif
Other DBs
NCBI-GeneID:
550474
NCBI-ProteinID:
NP_001017777
ZFIN:
ZDB-GENE-050417-299
Ensembl:
ENSDARG00000038863
UniProt:
Q568D5
LinkDB
All DBs
Position
17:41081997..41264361
Genome browser
AA seq
386 aa
AA seq
DB search
MNSLSPELALSRISPELRPLLCSIVRNGRVGLDSSSCLRITDLKSGCTSLMPGPCCDRFK
LHIPYAGETLKWDIIFNARDPELPPDFIFGEDADFLPEPSELPNLVSWDSGKPECLLLLV
KEMLQQYHQYQCQRLRDSSRLLFEYDSLLEDPNYGRNMEIYAGRKNSWTGEFSARFLLKL
PVDFSNIPIYLLKDTALDPGEDVALLSVSFEDAEATQVFPKLYLSPSIEHALGGSSALHI
PAFPSGGCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIAAFLSHFGMGVVEYDAVGFTKL
TLLLMWKDFCFLVHVDLPLYFPRDQPTLTFQSIYHFTSSGQLYSQVQKSYPYSPRWDGNE
MAKRAKAYFKSFIPQFQEGAFANGKL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtctctctccagagttggcattgagccgtatttctcctgagctgcggccttta
ctctgctctatagtgaggaatggacgggttggtttggattcatccagctgtctccggatt
actgacctcaagagtggctgcacatcactgatgcccggtccttgctgtgacagatttaaa
cttcatattccatatgctggagagactctcaaatgggacatcatctttaacgccagagac
ccagaactgcccccagactttatcttcggagaagatgccgactttcttcctgaaccatct
gaactcccgaacttggtttcatgggactcgggtaaaccggagtgtctcctgctgctggtg
aaggagatgctgcagcagtaccatcagtaccagtgccagcggctgcgagacagttcccgt
ttgctctttgaatacgacagcctgctcgaagacccaaactatggacgtaatatggagatc
tatgctggacgcaagaacagctggacgggggagttttctgctcgtttccttctcaagctc
cctgtggattttagcaacattcctatctatcttctcaaggacacagcactggatccagga
gaggatgtcgctcttttgtctgtcagctttgaagatgcggaagccacacaagtctttcca
aaactctacctatctcccagcattgagcatgctcttggcggatcttcagccttacatatc
ccagcatttcccagtggaggatgccttattgactacgtgcctcaagtgtgccaattactc
acaaacaaggttcagtatgtcattcaaggatatcacaagaggagagaatacattgctgct
tttctcagtcactttggcatgggtgtggtggagtatgatgctgttggctttaccaagctc
acccttctgcttatgtggaaagacttctgcttcctggtccatgtggatctgcctttgtac
ttccctcgagatcagcccaccctgacgtttcagtccatctatcacttcaccagcagtggg
cagctctactctcaggtgcaaaaatcctacccctacagtccacgctgggatgggaacgag
atggccaaacgagccaaggcttacttcaagagctttatccctcagttccaagagggggct
tttgccaatggaaagctgtag
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