Danio rerio (zebrafish): 553292
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Entry
553292 CDS
T01004
Symbol
setdb1a
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-A
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00310
Lysine degradation
dre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
553292 (setdb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
553292 (setdb1a)
Enzymes [BR:
dre01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
553292 (setdb1a)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
553292 (setdb1a)
Heterochromatin formation proteins
Other heterochromatin formation proteins
553292 (setdb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_5
SET
Pre-SET
Tudor_4
MBD
DUF5604
Sigma54_AID
DUF4537
PRDM2_PR
Motif
Other DBs
NCBI-GeneID:
553292
NCBI-ProteinID:
NP_001038232
ZFIN:
ZDB-GENE-030131-2421
Ensembl:
ENSDARG00000041243
UniProt:
Q1L8U8
LinkDB
All DBs
Position
19:9111548..9144392
Genome browser
AA seq
1436 aa
AA seq
DB search
MSREKDDENLLRMTKDDLQRWIQAEVERNPHLMQRREQLAQVEEWVKQKERDSTCTRLLY
SNACESVLECESVMKGLYALLGLDYRDEDSEEEGGGGQPHDVIQIADDEAERRGNVICNG
EDDDNDDLVVIDLGATKETLEPMLEKVTVAIQKSSKLVQDLVQMVSKTSMGATSPLSTSS
SDINRPSSSSTPEIVRPESVTPKLEITNSITIVKTESLSSVPKISSLFNSSEQCKSIADH
DSYFKPTIKTEPEWTPLTPWEDSESSPFEKLIKTESQSTDVTPSVMTPNKQPELLSFQST
TKIKPEPQSTQANTELSSPPSNSKLLENHNSLSIAAIKNESQLKASVSEVDLLESDSEQS
DNAATKTRFKPSEVTASSKLKSSGDHNSASASLNRTDPKVRPVTPSGTPPPSKSPPAVDN
TASVETNQTDSELPTETPVEESTLPSNPKEAVIMSDAESTDKTEKPQTRKKSSKPSVTTT
SPESRLTSSKSPPVTKTSSTQKETARAQSPSDSIDESADMEDSPDEPSNSPTESPTKTPD
KTTRNDAPAKPSKAKKSSKHSSSESSKTLKEIKLKVGAAVLGKKRHNHWSRGTVQEVETE
DDGNTYKVEFKKGKTIVLSANHVAAYKPPSLKDLYIGCRVVASAKSENGKSLYNAGVMVE
LPERKNRMRFLVFFDDGLATYLALPDLYFVCKQTKKVWREIKDESSRKQVKDYLQVYPNP
IAVVLRLGQETKAVRNGQFEDCTVLQLDGSLVQICYKNDKQKEWIYKGSDKLEHILTIKN
RHKQHSHKKHHSPEGKTQSSQPKTLHSSKSASTSTSSANVSPVSSDSVSPARVTRQSDKT
KTSISPQKIMSPAFQPKVVLQKISLPSSISPAARVSNSNTNSSLISAKRPAPDEEEDEYF
SEDEVEVLEQEQNKSVYLHQRCCPACLEEVRPHQVDIHHGKNPLLIPLLFKFRRMTARRR
IDGKLFFHIFYRSPCGRSLCDMQEVQDYLFETRCDFLFLEMFCMDPFVLVNRARPPSTTT
GQPHLYLPDISEGKEVMPVPCVNEVDNTLAPNVTYTKDRVPARGVFINTSSDFMVGCDCT
DGCRDRSKCACHKLTIEATSLCTGGPVDVSAGYTHKRLPTSLPTGVYECNPLCRCDPRMC
SNRLVQHGMQLRLELFMTQHKGWGIRCKDDVPKGTFVCVFTGKIVNEDKMNEDDTMSGNE
YLANLDFIEGVEKLKEGYESEAYCSDTEVESSKKTITMKTGPLLKNSLYKEDSSSGEEPM
EVDTAKDKVKVHDKPLGERKLPNKPHETPKDTQKKISELRKNDGQESSGPKRCFAIKSFQ
RRVKPLESTEAQKEKTKTPKNTRGLFNDEDACYIIDARQEGNLGRYINHSCSPNLFVQNV
FVDTHDLRFPWVAFFASKRIKAGTELTWDYNYEVGSVEGKVLLCCCGSLRCTGRLL
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgggaaaaggatgatgaaaacctcctgaggatgacgaaggatgacctgcagagg
tggatccaggcggaggtggaacgaaaccctcatttaatgcagagacgcgagcagctggcg
caggtggaggagtgggtgaagcagaaggagagagatagcacttgcacacgccttctgtac
agcaacgcctgcgaatccgtcctggagtgtgagtcagtgatgaagggtctttatgcgttg
ctgggattggattaccgagatgaggactcggaagaggaaggaggagggggacaaccacat
gacgtcatccagatcgcagatgatgaggcagaacgacgtggaaatgttatctgtaatgga
gaggatgatgataatgatgatcttgttgttattgatctgggcgccaccaaagaaaccttg
gaaccaatgcttgaaaaggtgaccgtggccattcagaagtcatccaaacttgttcaagac
ttggtgcagatggtgagcaaaacctctatgggtgccacttcaccattgtcgacatcatca
tctgacatcaacagaccctcatcatcttcaacccctgaaatcgtccgtcctgagtctgtc
acgccaaaactggaaataactaactctatcaccatagtcaagaccgagtctttatcaagt
gttcctaaaatatcctcacttttcaacagctcagaacaatgcaaatctatcgccgatcat
gattcatattttaaaccaacgattaagacagaacctgaatggacacctttaacaccttgg
gaagatagtgagtcatctccattcgagaaattaattaagactgaatcccagtcgacagat
gtgaccccttcagtaatgactccaaacaaacaaccagaacttctcagttttcagtccaca
acaaaaataaagcccgagcctcagtcgacacaagcaaatacagaactgtcttcaccgcca
agcaattcaaaactattagaaaatcacaattcactgtccattgcagcaattaagaatgag
tctcagctaaaggcatcggtttctgaagtggatttacttgaaagcgattcagaacagtca
gacaacgcagctacaaaaactagatttaaaccctcggaagtcactgccagctcaaagcta
aaatctagtggggatcataattcagcatctgcatctttaaatcggactgatcctaaagta
aggccggtgaccccttcaggaactcctccaccctcaaaaagtcctcctgctgttgacaat
acagcatccgtagaaacaaatcagactgattccgaattgcctacagaaactcctgttgag
gagtcgactttgccaagcaatcctaaagaagctgtgattatgagtgatgcagaatccaca
gacaaaaccgaaaagccacaaacaaggaaaaaatctagcaaaccctctgtgaccacaaca
agtcccgaaagcaggctgacgtcttcaaaaagcccacctgtaacgaagacgtccagcacc
caaaaggaaaccgcaagggctcaatcgccgtcagacagcattgatgaatccgctgacatg
gaagattcgcctgatgaaccatctaattcacctacggagtcacctacaaaaactccagac
aagaccaccaggaatgatgctcctgctaaaccttccaaagctaagaaaagttccaagcat
tcatccagcgagtcctctaaaacacttaaagagatcaaacttaaggtcggggcggcagtt
ttaggaaaaaagagacacaaccattggagtcggggaacagtgcaagaagttgagaccgaa
gatgatggcaatacgtataaggtggagttcaagaagggtaaaaccattgtgctgtctgct
aatcatgtggccgcctacaagcctccttctctcaaggatttgtatatcggctgtcgtgtc
gtggccagcgccaaatctgaaaatggaaagagcttgtataatgctggtgtgatggttgag
cttcccgagcgcaagaatcgcatgaggttcttggtgttttttgatgatggcctggcaacc
tatttggcccttccagacctttattttgtctgcaaacaaacaaaaaaagtatggagggaa
atcaaggatgagtcatctcgcaagcaggttaaggattaccttcaagtctatcccaaccct
attgctgtggtgcttcgcttgggtcaagagaccaaggcagtgcgaaatggccaatttgag
gactgtacggtgcttcagctagatggcagcctggtccagatctgctataagaatgacaag
cagaaggagtggatttataaaggatcagacaagttggagcatattttaactatcaagaat
cgtcacaaacaacactctcacaaaaaacaccattcacctgaagggaaaacgcaatcttct
caacccaaaacactgcattcctctaaatcagcttccacctcgacatcatcagccaatgtt
tcacccgtctcttcagatagtgtgtctcctgcacgtgtgaccagacagagcgataagacc
aaaacatctattagccctcaaaaaatcatgtcgcctgcttttcagccaaaggttgttctc
cagaaaatatctttgccctcgtctatctcaccagctgccagggtatcaaatagcaacact
aactcaagcttaataagtgcaaaacgacctgcccctgatgaagaagaagatgagtatttt
tctgaagatgaagtggaggttttagagcaagagcagaataagtctgtatatttacatcag
cgttgttgccctgcatgtctggaggaggtgaggccgcatcaagttgacatacaccatggg
aaaaatccacttcttatcccactgctttttaagtttcggcgaatgactgcccggaggcgc
attgatggaaagctatttttccacattttctatcgttctccttgtgggcggagcctgtgt
gacatgcaggaagtgcaagactacttgtttgaaacgcgttgtgacttcctcttcctggaa
atgttctgtatggatccgtttgttcttgtgaaccgtgcgcgacccccttccactaccaca
ggacaacctcacctgtacttgccggacatttctgagggtaaagaggtgatgccagtgccc
tgtgtgaatgaagtggacaataccctcgcgcctaatgtcacttacactaaagacagggtt
ccagctcgaggggttttcatcaacacaagctcagactttatggtcggctgtgactgcaca
gatggctgtcgagacaggtcgaaatgtgcttgccacaagctgaccattgaggccacatcc
ctatgcacaggaggtccagtggatgttagtgctggatacacacataagaggctgccaaca
agcttaccaacaggggtgtatgagtgtaaccctctctgccgctgtgacccgagaatgtgc
agcaacaggctggtccagcacggtatgcagctgcgcctggagctcttcatgacacaacat
aagggatggggcatccgctgcaaagatgacgtgcccaagggcacctttgtgtgcgttttc
actggtaaaatagtgaatgaagacaaaatgaatgaagatgacaccatgtccggcaatgag
tatttggccaatctcgacttcatcgaaggtgtggagaaactgaaagagggttatgagagc
gaggcctactgctctgatactgaggtggaaagcagcaagaagaccataaccatgaaaacg
gggccattgttaaaaaattccctatacaaggaggactctagcagcggtgaagagcccatg
gaggtggacacagcaaaagataaagtgaaagtccatgacaaacctttaggtgagagaaaa
ctgccaaataaaccacatgaaacaccgaaagatactcagaagaaaattagtgaactaagg
aaaaatgacggacaagagagctcaggcccgaagcgatgctttgccataaagtcattccag
agaagagtaaaaccactagaaagcactgaagcacagaaagaaaaaactaaaactcccaaa
aacacacgcggactgttcaacgatgaggacgcttgttacatcattgatgctcggcaagag
ggaaacctcggccgttatataaaccatagctgcagccccaatttatttgtccagaacgtc
tttgtggacacacacgacctccgctttccatgggtggctttctttgctagcaagcgcata
aaggcaggtacagagttgacgtgggattataactatgaagtgggcagtgtggagggaaag
gtgctgctctgctgctgtggctcattgcgctgcactggaagactgctctga
DBGET
integrated database retrieval system
