Danio rerio (zebrafish): 554016
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Entry
554016 CDS
T01004
Symbol
pcdh1g32
Name
(RefSeq) protocadherin 1 gamma 32
KO
K16497
protocadherin gamma subfamily C
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dre04515
]
554016 (pcdh1g32)
Cell adhesion molecules [BR:
dre04515
]
Cadherins
Protocadherins
554016 (pcdh1g32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
554016
NCBI-ProteinID:
NP_001019299
ZFIN:
ZDB-GENE-050609-25
Ensembl:
ENSDARG00000100829
UniProt:
I6LC24
A0A8M1N6K1
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All DBs
Position
10:21807497..21820060
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AA seq
945 aa
AA seq
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MESKELFQKTLDLTAVWMVLHALCFATHASELLYSTAEESKPGTIVGHLTKDLGMDIHMI
VLRQMRIISESNDKYFNVDLTSGALVIKETMDREILCGGRLHCHIRIQISLQNPLEMHSV
SIEIVDVNDNAPQFQSQNTSLEVSEAAAPGTSFRLESAHDPDVGVNSLRAYYLSQNDCFI
LKIDTKSDGSKIPILVLNKPLDREKMSEYRLILTAVDGGSAEKSGNSAVFINILDVNDNA
PHFLNPTKRVTLLENSPHGTLVTLLNASDADHGQNGEISYTFDKYTPDSVLKLFSVDSVT
GEIRVTGLIDHELAKVHDVTVLARDKGMPPMEGSCNIKIEIIDVNDNTPEISINMVSSVI
SEDVTLGTVIALIKVKDEDTGKNGEVNLHIPYGLPFKISSPYKGLFTLMADGLLDREAVA
EYTITVTATDSGSPPRSSQKSFVLCLSDVNDNPPVFSQPSYSVDIAENNAPNAPLLSVSA
SDPDVGENSTISFSILESEALGLSVSSYVYINPNSGQIYAIRKFDYEHLNAFQFVVRVQD
RGTPSQSSNATVHVFITDQNDHPPILIYPAPTSDGTLHFFIPRTASIGHLVNRITFVDGD
SGHNAWLFYSILGPDAEMFHIDAHTGELRTAQKLSEEDSKSVFSLNVIVKDNGRPSRSAS
VAVNITLAEKSSDVSSERRSLTSKTPTGSNLTLYLIITLSFIIAFSFLAIIAIAVRWLSH
HGYMICLMQKLGFKHTPRAHQHNDLHLQLNTDGPIRFMEVVGATQDFHKHAYTPGLSTIS
SRSDFVFVKAPESTLSMRLSKRLFAHSLMKQKPPNTDWRFPPNQRPGPSGAGARPEEAGA
GAGVIAGTGPWPNPPTEAEQLQAMMAAANASEATATLGPRYNLQYGPDYRQNVYIPGSTA
TLTANPQQQVLQQALPPPQALPPTEAPKAAQTPASKKKPTKKDKK
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggagagtaaagagctttttcagaaaactttggacttgacagcagtttggatggttctt
cacgctttgtgttttgcaacacatgcttcggaacttttatattccacagcggaggaatct
aaaccaggaactattgttggacacttgactaaagatttaggaatggatatacatatgata
gttttaagacagatgcgcataatctcggaatctaatgataaatattttaacgtggacctg
acatctggagctttggtgatcaaggaaacaatggacagggagattttgtgtggaggacgt
ttacattgtcacattcggatccagatttctcttcaaaatccgttggaaatgcacagcgtt
tcgattgaaattgtggatgttaacgacaacgcgccacagttccaaagccaaaatacttct
ttggaagtttcagaagcggcagctcccggcacgtcgttccgcctagaaagtgcgcatgac
ccggacgtgggagtgaattcactgcgcgcttattatctcagtcaaaacgactgtttcatt
ctaaaaatagatacaaaaagtgatggcagcaaaatcccaattttagtcctaaacaagcct
cttgacagagaaaagatgagtgaataccgattaattttaactgcagttgatggtggcagt
gcagagaaatccggcaatagtgctgtttttataaatattcttgatgtcaacgacaatgct
ccacactttcttaatcctactaaaagagtcactcttttagaaaattctccgcatggaaca
ttagtcacacttcttaacgcctctgatgccgatcatggtcaaaatggtgagatatcttac
acttttgacaaatacacacctgacagtgttctgaaactgttcagcgtggattcggtgaca
ggcgaaattagagttacgggactgatcgatcacgagctggcgaaggtgcatgacgtcacg
gtcctagcaagggacaaaggaatgcccccgatggagggctcgtgcaacatcaaaatcgag
attatagacgtgaacgataacacacctgaaattagcattaacatggtttcttctgtaata
tctgaagatgtgactttaggcactgtcattgcacttattaaagttaaagatgaagacaca
ggcaaaaatggcgaagtgaacctgcacattccttatgggttgcctttcaagatcagttcg
ccatataagggccttttcactttaatggccgatggccttctggacagagaagctgtggct
gaatacaccatcactgtgaccgccacagactctggttccccgcctcgctcctcgcagaaa
tcttttgtgctgtgtctttcagatgttaatgataaccccccagtcttttcacagccttcc
tactctgtggacatagctgaaaacaatgccccaaatgctccccttctgtccgtgtctgcc
tcagacccagatgtgggtgaaaattccaccatttcattctcaattttagagagtgaggct
cttggtttgtctgtttcttcatatgtatatataaacccaaatagtgggcaaatttatgct
atcagaaagtttgattatgaacatctgaatgcgtttcaatttgtagtgcgggttcaggat
agaggaactccatctcaaagctctaatgccactgtgcacgtgtttattacggatcagaat
gatcatcctcctatccttatttaccctgcacccacatccgatgggactctacattttttt
atacctagaactgccagtatcggacacctagtaaatcgtattacgtttgtagatggtgat
agtggtcacaatgcctggttattctacagcatcttggggcctgatgctgaaatgtttcac
atagatgcacatactggagagctgcgtactgcacaaaaactttcagaagaggacagcaaa
tctgtctttagccttaatgtgattgtaaaggataacggaaggccttctcgttctgctagt
gtggcagttaacatcaccctggctgaaaaatcctcagacgtttcttctgaacgcaggagc
ctcacctccaaaacaccaactggatctaacctcacactgtaccttataatcacattatct
ttcattattgctttctctttcctggctatcattgctatagcagtacgctggctcagccat
catggttatatgatctgcctcatgcaaaaacttggttttaaacacacacctcgtgcgcac
caacataatgaccttcatctgcaactaaacactgatggtcctattagattcatggaggtc
gtgggggccactcaggatttccacaaacacgcgtatactcctggtttgtccaccatctcc
agtaggagtgattttgtgtttgttaaggccccagagagcactctaagcatgcgactgtca
aaaagactcttcgctcactcacttatgaagcaaaagccacctaatactgactggcgattt
cccccaaaccagaggcctggacccagcggggctggagcacgtcctgaagaggcaggtgcc
ggtgctggtgtgatagcaggaacaggaccatggcccaacccccctactgaggctgaacag
ctccaggctatgatggcagcagcaaacgcaagtgaagccactgcgactcttggccctcgc
tacaatctacagtatggcccggattaccgtcagaacgtctacatcccaggcagcactgcc
acccttacagccaaccctcagcaacaggttctccagcaggcccttcctccaccacaggcc
cttccacctaccgaagcccccaaagcggctcaaacaccagccagtaagaagaaacccaca
aagaaagacaagaagtaa
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