Danio rerio (zebrafish): 556077
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Entry
556077 CDS
T01004
Symbol
plod3
Name
(RefSeq) multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 precursor
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00310
Lysine degradation
dre00514
Other types of O-glycan biosynthesis
dre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
556077 (plod3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
556077 (plod3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dre01003
]
556077 (plod3)
Enzymes [BR:
dre01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
556077 (plod3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
556077 (plod3)
2.4.1.66 procollagen glucosyltransferase
556077 (plod3)
Glycosyltransferases [BR:
dre01003
]
O-Glycan biosynthesis
O-linked Gal type
556077 (plod3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2OG-FeII_Oxy
Anp1
2OG-FeII_Oxy_3
HK_sensor_dom_bact
Motif
Other DBs
NCBI-GeneID:
556077
NCBI-ProteinID:
NP_001037808
ZFIN:
ZDB-GENE-021031-4
Ensembl:
ENSDARG00000076317
UniProt:
A3KNH4
LinkDB
All DBs
Position
23:complement(48776152..48811478)
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AA seq
730 aa
AA seq
DB search
MTPVPVILTVILAVIQLSRTEPRKPNELLVITAATEVTDGYLRFMRTIRQFNYTIQVLGL
GEQWRGGDVARTVGGGQKVRWLKTELEKHKDKQNTVIMFVDSYDVILASGPVELLRKFSR
FSHRVVFSAEGFCWPDQRLASKYPAVHHGKRYLNSGGFIGFAPEIHAIVQQWKYKDDDDD
QLFYTRIYLDKEKRRKFNMTLDHRSQIFQNLNGAIEEVVLKFEKSRVRVRNVAYDTLPVV
IHGNGPTKLQLNYLGNYVPTAWTYENGCGICEEDLLDLSHLSDEEMPLVHVAVFIEQPMP
FLEEFLERLATLNYPHTRIRLFLHNNVVYHEQHVERFWTRHRSLFTGARIVGPEENLKHD
QARTMAVEACKKDVSCDYFFSLDADVALTNPDVLRILIEENKSVIAPMLSRHGKLWSNFW
GALSPEGFYSRAEDYIDIVQSKRVGLWNVPYITQVYLIRGETLRSRLAAVSLYQQEGMDP
DMSFCKSVREQGIFMFVSNRDEFGRLVSSANYNISRLHPDMWQIFDNPVDWREKYIHENY
SRIFEDDESVVEQPCPDVYWFPAFSERMCDDLVETMEEFGQWSGGGHKDERLSGGYENVP
TVDIHMNQIQFEKEWLKFLKEYIVPVTEKLYPGYYPKAQAVMNFVVRYRPDEQPSLRPHH
DSSTFTINIALNSKGVDYEGGGCRFLRYNCKVESPRKGWSFMHPGRLTHYHEGLPTTRGT
RYIMVSFVDP
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgactccggtgcccgtgatcctgaccgttattctggctgtaattcagcttagcagaacc
gaaccgcggaaacccaatgagctgctggtgatcaccgctgctacagaagtgactgatgga
tacctgaggttcatgaggaccatccgacagttcaactacactattcaggttctgggtctg
ggtgagcagtggagaggaggtgatgttgctcggactgtcggtggaggtcagaaggttcga
tggctgaagacagaactggagaaacacaaagacaagcagaacactgtgatcatgtttgta
gacagttatgatgtgattttagccagtggtccagtggagctgctcaggaagttttctcgt
ttctctcatcgtgtggttttctccgctgagggtttctgctggccggaccagagactcgcg
tccaaataccctgcagtgcatcatgggaaacgctacctcaactctggaggcttcatcggc
tttgctcctgagattcatgccattgtgcagcagtggaaatataaagatgacgacgacgac
cagctgttctacacacgcatctacctggacaaagagaagaggaggaagttcaacatgact
ctggaccacagatcgcagatatttcagaatctgaatggagccatagaggaggtggtgctg
aagtttgagaagtccagagtcagagttcgaaatgtggcctatgacacacttcctgtggtc
attcatggaaacgggccaaccaagctccagctgaattacctgggtaactatgtgccgacg
gcgtggacctatgaaaatggctgtggaatctgtgaggaggatttgctggatctcagtcac
ctgtctgatgaggagatgccgctggtgcacgtggccgtgttcatcgagcagccgatgccg
tttctggaggaattcctggagagactcgctacgttgaactacccacacacacgcatacgg
ctcttcctgcacaataacgttgtgtatcacgagcagcatgtggagcggttctggactcgt
catcgctcactcttcactggggcaagaattgtcggaccagaggaaaacctcaaacatgac
caggccaggaccatggcagtggaggcgtgtaagaaggacgtctcctgcgattatttcttc
agccttgacgctgatgttgctctgaccaatcctgatgtgttacgaattcttatcgaagag
aacaagagtgtgatcgcgcccatgctatcccgacacgggaaactctggtcaaacttctgg
ggcgctttgagtccggagggtttctactcgcgcgcagaggactacatcgacatcgtccag
agcaagagagtgggtttgtggaacgttccctacatcactcaggtgtatctgatccgtgga
gagactctgcgctcgcgtctggctgctgtttctctctaccagcaggagggaatggatcca
gacatgtccttctgcaagagcgtccgcgagcagggcatcttcatgtttgtgtctaataga
gatgagtttggtcgcttggtctcgtctgcaaactacaacatcagtcgtcttcatccagac
atgtggcagatattcgacaacccagtggactggagagagaagtacattcatgagaattac
tccaggatatttgaagatgacgagagtgttgtggagcagccgtgtccagatgtgtactgg
tttcctgccttctctgaacgaatgtgcgatgatctcgtcgagaccatggaggaattcggc
cagtggtctggaggaggacacaaggatgaacggttgtctggaggttatgagaacgttcct
acagtggacattcacatgaatcagatccagtttgagaaggagtggctgaagttcctcaaa
gagtacatcgttcctgtcactgagaaactctacccgggatactatcccaaggctcaggct
gtgatgaatttcgtggttcgttatcgtcctgacgagcagccgtcgctccgtcctcatcac
gactcctccaccttcaccatcaacattgccctcaacagcaaaggcgtcgattacgagggt
ggaggttgtcggtttctccgctacaactgtaaggtggagtccccaaggaagggctggtcg
tttatgcacccgggccgattaacacactaccacgaggggcttcccaccacacgggggacg
cgctacatcatggtgtcattcgtagacccctga
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