KEGG   Danio rerio (zebrafish): 556544
Entry
556544            CDS       T01004                                 
Symbol
si:dkey-199f5.8
Name
(RefSeq) beta-1,4-galactosyltransferase 3
  KO
K07968  beta-1,4-galactosyltransferase 3 [EC:2.4.1.90 2.4.1.38 2.4.1.-]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre00510  N-Glycan biosynthesis
dre00513  Various types of N-glycan biosynthesis
dre00514  Other types of O-glycan biosynthesis
dre00515  Mannose type O-glycan biosynthesis
dre00533  Glycosaminoglycan biosynthesis - keratan sulfate
dre00601  Glycosphingolipid biosynthesis - lacto and neolacto series
dre01100  Metabolic pathways
Module
dre_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
dre_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:dre00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    556544 (si:dkey-199f5.8)
   00513 Various types of N-glycan biosynthesis
    556544 (si:dkey-199f5.8)
   00515 Mannose type O-glycan biosynthesis
    556544 (si:dkey-199f5.8)
   00514 Other types of O-glycan biosynthesis
    556544 (si:dkey-199f5.8)
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    556544 (si:dkey-199f5.8)
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    556544 (si:dkey-199f5.8)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:dre01003]
    556544 (si:dkey-199f5.8)
Enzymes [BR:dre01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     556544 (si:dkey-199f5.8)
    2.4.1.90  N-acetyllactosamine synthase
     556544 (si:dkey-199f5.8)
Glycosyltransferases [BR:dre01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   556544 (si:dkey-199f5.8)
  Glycolipid
   556544 (si:dkey-199f5.8)
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C
Other DBs
NCBI-GeneID: 556544
NCBI-ProteinID: XP_684461
ZFIN: ZDB-GENE-030131-4733
Ensembl: ENSDARG00000018853
UniProt: E7FCM6
LinkDB
Position
16:complement(46161526..46208533)
AA seq 390 aa
MRSPIEFSSSNSSKLKSLSFDSQWCTTSLSVIMFTLQTKWRYLIMFLGVQLVVMALLSRE
GYQKRVSYFFRIFRKPDSSAGSMIGGRNHTDVYANLSRLGPPINRDDMPYCPKQSPHLVG
PIHVTFPSGLTLADVERKNPLVVRGGRYRPPNCEARHRTAIIIPHRSREHHLKFLLYYLH
PFLQRQQLNYGIYIIHQAGNYTFNRAKLMNVGFREAMRDEDWDCLFFHDVDLIPEDDRNT
YICDAHPKHAAIAMDKFGYKLPYKMYFGGVSALSPDQYLKMNGFPNNYWGWGGEDDDIGV
RVSLGGMVISRPSINVGRYKMIKHKHDKGNEVNPKRFNMLAKTRHTWKEDGMNTVEYEII
SRDYQPLYANITVNIGTEAGLHPTKNKPAS
NT seq 1173 nt   +upstreamnt  +downstreamnt
atgagatcaccaatagagttcagttcctcaaattcatccaaacttaaatcactctcattt
gactctcagtggtgcactactagcttgagtgtcatcatgttcacgctgcaaaccaaatgg
cgttacttgatcatgtttttaggcgtccagttagtggtcatggctcttctgtcaagagaa
ggctatcagaaaagagtgtcgtattttttccggatattccgaaagccggattcttcggca
ggaagcatgattgggggacgcaaccatacagatgtctacgccaacctttcccggttaggc
cctcctattaatagagatgacatgccctactgccccaagcaatctccacacctagttgga
ccaattcatgtcactttcccttccgggctcacacttgccgatgtggagaggaagaaccca
cttgttgtccgtggaggtcgctataggccgcccaactgtgaggctcgccaccgcaccgca
ataatcattcctcacagaagccgggagcaccatctcaagttcctcctctactatctgcac
cccttcctacagcgccagcagctcaactatggcatctatatcattcaccaggctggtaat
tacacctttaaccgagcgaagctgatgaacgtgggctttcgtgaggccatgagggatgag
gactgggactgtctcttctttcatgacgtggacctcattccagaggacgaccgcaacacc
tacatctgcgacgctcaccctaaacacgctgccatcgccatggacaaatttggctacaag
ttgccttataagatgtattttggtggagtgtcggctctgagtcctgatcaatacctcaag
atgaacggcttcccgaataattactggggctggggtggagaagatgacgacattggcgtc
cgggtttcgcttggaggaatggtgatcagccgaccatccatcaacgtgggtcgatataag
atgatcaaacacaagcacgacaaaggcaatgaagtgaatcccaaaaggtttaacatgttg
gccaagacccgtcatacgtggaaagaagacggcatgaatacagtggagtatgagatcata
tcccgggattaccaacccctctacgccaacatcacagtcaacatcggcacagaggcaggc
ctgcacccgaccaaaaataaaccagcttcctaa

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