Danio rerio (zebrafish): 558474
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Entry
558474 CDS
T01004
Symbol
lemd3
Name
(RefSeq) inner nuclear membrane protein Man1
KO
K19410
inner nuclear membrane protein Man1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
558474 (lemd3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dre04812
]
558474 (lemd3)
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
558474 (lemd3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MSC
LEM
RBM39linker
Motif
Other DBs
NCBI-GeneID:
558474
NCBI-ProteinID:
NP_001038329
ZFIN:
ZDB-GENE-030131-490
Ensembl:
ENSDARG00000015824
UniProt:
Q5TZH9
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Position
4:complement(13492590..13505438)
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AA seq
841 aa
AA seq
DB search
MASAQLTDEELVSELKRLGFTPGPVTESTRPVYLKKLKKLREEQPQLRGSRSGKGRSSSG
TINNNGSGASSNSSSAARAPGFSARPPTSDVTRLSASRSEKRKAGKFVLGFSSDESDVEA
PQKKGGPNHGGSRRDRGSAQQTPTIRPAGTPAAAVSLGLSADRKSVSGSPWWADRGKSGD
LAETERDSRAVNGNKAFYESNSSKLARDYSDSDEEEEEVGERDRPRERRLTSRHSPPASS
SPYRSAWSSDKTALGAHDTPDYNLDMVGERRDEDDKEPSEFSGSYVSRSYPKLSGTGRDD
NSGGSSIPSGSFHRNHLDNGDGESACSSRFSIGLRPRFPSYTATYRANHSNHTGSNHSYS
HASAHKSKQHTTVPEDELLQQFKREEVSSTGGFSAHYLSMFLLTAACLFFVLLGLMYLRM
RGSGTAVGDAVIMQHPFGAEFDKQYDVKERELILNLLLSLHEHLASVAGEHDCGDFKNPL
NRSVSFSDASKYLKLQNEAYENLIETSLEWVMKTKDVVGIRLIGGDPDHPIEDVSEISRL
ESIHPRMSFFCRFRRAFFTVIYRVLLILAGIGVVVGLVYYMKYRWRKEEEETRHMYDMVE
RIIDVLRSHNEACQENKDLQAYLPIPHVRDSLVQPQERKRMKKVWDRAVSFLSANESRIR
TEKQRIGGADFMVWRWLQPSMSPDKMCNMPSKVWQGQAFPLDRRNSPPNSLTPCLKIRNM
FDPVMEVGENWHLAIQEAILEKCSDNDGIVHIAVDKNSREGCVYVKCLSAEHSGKAFKAL
HGSWFDGKLVTVKYLRLDRYHQRFPQALGSNTPLKPSSSSMNSMSRLNQRSSTSSLKDTF
S
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgcacagttaacggatgaggagcttgtgtctgaattgaaacggctcggcttc
accccgggcccggtgacggagagcacgcggcccgtgtacttgaaaaaactgaaaaagctg
cgggaagagcagccacaactgcggggctcccggagcgggaaagggcgcagcagcagcgga
actatcaacaacaacggcagcggcgctagcagcaacagcagctcggcggcgcgagctccg
ggattcagcgccaggccaccgaccagtgacgtcacgcgcctgagcgccagccggagcgaa
aagcgcaaagccggaaagttcgtgctgggctttagctcggacgagtcggacgtagaggct
ccgcagaaaaaaggaggcccgaatcacggcggcagcaggagagaccggggatccgcacag
cagacacccaccatcaggcctgcgggaacacccgctgccgccgtctccctcgggctatcc
gcggacaggaaaagcgtttctggctctccgtggtgggcagaccgggggaaatcgggtgat
ttagcggaaacggaaagagacagtcgggctgtgaatgggaataaggctttttacgagtcg
aacagtagtaagttagccagggattactctgattccgacgaggaggaggaagaggtgggt
gaacgagaccgtccgcgcgaacgccgtctgacttccagacacagtccacccgcctcttct
tccccttaccggagcgcctggagctcggataagacggcgctgggcgcgcatgatacacca
gactacaacctagatatggtcggggaacggagggacgaggatgacaaggaacctagcgag
tttagcggaagctacgtgagccgcagctacccgaaactgtccggaacgggcagggatgac
aacagcggtgggagcagcatcccgtctggttctttccataggaatcacctcgacaatgga
gacggcgaatccgcctgcagcagccggttcagcatcggtctcagaccacgctttccttcc
tacaccgcgacttaccgagcgaaccactcgaaccacaccggttccaatcactcctatagc
catgcttcagctcacaagtccaagcagcacaccacggtcccggaggacgagctcctgcag
cagtttaagcgggaggaggtgtcctccaccggcggcttcagtgcccactacttgtccatg
ttcctcctgacagccgcctgcctgttcttcgtgctgctgggcctcatgtacctgaggatg
aggggctccggcaccgccgtgggtgatgcagtcatcatgcagcatccattcggagctgag
tttgataagcagtatgacgttaaagagcgagaactcatccttaaccttctcttgtctcta
catgagcacctggccagtgttgcaggagaacatgattgtggagattttaaaaatccttta
aacagaagtgtctcttttagtgacgcctccaagtacctcaagctccaaaatgaagcctat
gaaaacttgattgaaacgtctttagaatgggtcatgaaaaccaaagatgttgttggaata
aggttgattggtggtgaccctgatcatcccatagaggatgtatctgaaatctctcgtctg
gagtccatccacccccgcatgtccttcttctgccgcttcagacgagccttcttcactgtg
atctacagagttctcctcatcctcgcaggcatcggtgttgttgtgggtttggtgtattac
atgaaatacagatggcgcaaggaagaggaggaaaccagacatatgtatgacatggtggag
cgaataatcgatgtcctgaggagtcacaatgaggcctgtcaggagaataaggacttgcag
gcatacctgcccatccctcacgtccgtgactctcttgtccagcctcaggagagaaagagg
atgaagaaagtgtgggacagagcagtttcattcctctctgcgaatgagtcccgcatccgg
acagagaagcagaggattggaggggcggatttcatggtgtggcggtggcttcagccctca
atgtcacctgataagatgtgcaacatgccctccaaagtgtggcaaggccaagcatttccg
ctggaccgaagaaattcgccaccaaacagcttaacgccatgcttgaagattcgcaacatg
tttgatcctgtaatggaagtgggggaaaactggcatctcgccattcaagaagccattttg
gagaagtgcagtgataatgatggaatcgttcacatagctgttgacaaaaactcaagagag
ggctgcgtttacgtgaagtgcctttcagcagagcattctgggaaagccttcaaagcgctc
cacggctcctggttcgatggtaagctggtgacggtcaagtacctgcgcctggatcgctac
caccagcgtttcccacaagccctaggctccaacacacctctcaaaccctccagctccagc
atgaacagcatgtctcgtctgaaccagcgctccagcacgtccagcttgaaggacacgttc
tcctga
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