Danio rerio (zebrafish): 558951
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Entry
558951 CDS
T01004
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X2
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
558951 (tdg.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dre03400
]
558951 (tdg.2)
Enzymes [BR:
dre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
558951 (tdg.2)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
558951 (tdg.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
558951
NCBI-ProteinID:
XP_009296251
ZFIN:
ZDB-GENE-131121-30
Ensembl:
ENSDARG00000086450
UniProt:
E7F5Y8
LinkDB
All DBs
Position
25:20209754..20220168
Genome browser
AA seq
399 aa
AA seq
DB search
MEERQYSSLTAPMDYLQYWYQSNPQQYQAEQVPQYQQLVNASQYTERPMEEKIMTDLSVH
QDPYQDQPQQFQQLPVQAPAIPVTPAKGKKRGRPRKGEEREKTEAEESAKKAKRTLDRFN
GMSVEEVMARKLPDVITHNLDMLIIGINPGLLSAYKGRHYPNPGNHFWKCLFLSGLTNEQ
LNHMHDQTLPEHYGIGFTNMVERTTPGSKDLSNKEIREGGHQLLEKLQTYRPLIAVFNGK
CIYEIFCKEIFGVKAKNLEFGLQPYKVPETETVCYLMPSSSPRCAQFPRAQDKVHFYIKL
KELRDQLKGVTKTQEIQETNYSFDLNLAKEDAKRMAIKEEQNDPGYEETCAHGSWGEPQQ
AFGVHPSTNTDQVMDDRWTMQPFAEQIPDIRCSNNTRTS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaggcagtattcctctctgacggctccaatggattatcttcagtactggtac
caaagcaaccctcagcagtaccaggctgagcaggtgccacagtaccagcagctagtcaat
gccagccagtacacagagagacccatggaggaaaaaatcatgactgatttatctgtgcat
caagacccatatcaggatcaacctcaacagtttcaacagctccctgtccaagcaccagct
attccagtgactcctgctaaaggaaagaaacgggggaggcctcgtaaaggggaagaaagg
gaaaagacagaagctgaagagtcagccaagaaagcgaagaggacattagatcggttcaac
ggcatgtcggtggaggaagtcatggctcgaaagctaccagacgtcatcacacataacctt
gacatgctgattattggcatcaaccctggactgttgtcagcctataagggaaggcattat
ccaaatcctgggaaccatttttggaagtgcttgtttctctctggtctgactaatgaacag
ctcaaccacatgcatgatcagacactacctgaacactacggcattggtttcaccaatatg
gtggagaggaccacccctgggagtaaagacctttcaaacaaagagatccgtgaaggaggc
caccagcttttggaaaagctccagacatacagacctttaattgctgtgttcaatggaaaa
tgtatttatgaaatattttgcaaggagatttttggagtcaaggccaagaacttagagttc
ggattgcagccgtacaaagtcccagaaacggagacggtttgctatctgatgccatcctca
agcccgcgctgtgcccagtttcctcgtgctcaggacaaagtgcacttctacatcaagcta
aaagagctcagggatcagctgaagggagtgaccaagactcaggagatccaggagacaaac
tacagcttcgatctgaatctggccaaagaggatgccaaaagaatggcaatcaaagaagag
cagaatgaccctgggtacgaggagacctgtgctcatgggtcgtggggggaaccacagcaa
gcgtttggagtccatccttctacaaatacagaccaggtaatggatgaccggtggacaatg
cagccatttgcagagcagattccagacatcagatgtagcaacaacacccgaacaagctaa
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