Danio rerio (zebrafish): 559170
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Entry
559170 CDS
T01004
Symbol
rapgef4a
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X3
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04081
Hormone signaling
dre04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
559170 (rapgef4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
559170 (rapgef4a)
Membrane trafficking [BR:
dre04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
559170 (rapgef4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
DEP
cNMP_binding
RasGEF_N
RA_2
Motif
Other DBs
NCBI-GeneID:
559170
NCBI-ProteinID:
XP_009302705
ZFIN:
ZDB-GENE-070912-385
Ensembl:
ENSDARG00000079872
UniProt:
A0A8M3AVP1
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All DBs
Position
9:complement(2946419..3034145)
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AA seq
866 aa
AA seq
DB search
MAGLLVPPYGVMDSGPNADRMPDKENLSNSSPGLSPKHLNKKSFIENPIKVHPKPINQVP
SEKILRAGKVLRNIILSRAPHMIRDRKYHLKTYRRSCIGTELVDWLLQHTSCVHSRVQAV
GMWQVLLEEGVLNHVDQEPTFQDKYLFYRFLDDESEDSGMPSEEDKKESDEELQDTLLLL
SQIGPDAHLRMILRKQPGQRTVDDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHAK
AGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLR
EDFCHFLRVDKEDFNRILRDVEANTVRLKEHEEDVLVLEKANNRSSSSSPLKYTVMSGTP
EKILEHLLETMKLDCQFSESDPALDDFLLMHCVFVPNSQLCPLLMTHYHAQASQGSEQER
MDYTLNNKRRVVRLVLQWASINTDHLQEEDSSFSFIQEFYEMVCEDSRLTPALKDHLPEL
EKIIKQNSDDGRPSQKKHKVLLRQFSTGNDRLQKRQPIKSTDEILFKVYCSDHTYSTIRV
PVSASVREVIAAVSDKLSSGDDLLLIHLNSAGDKELLKPSDVSIFSSLSINGRLFVCPRD
QIDSLTPLPEQEGPSAGSMSTFELMSSKDLAHQMTLYDWELFHCVHEHELIYHTFGRHHF
KKTTANLDLFLRRFNEVQLWVVTEVCLCPALSKRVQLLKKFIKIAAHCKEFKNLNSFFAI
IMGLGNPAVCRLSQTWEKLPSKFKKFYGEFENLMDPSRNHRAYRLTMAKLEPPIIPFMPL
LIKDMTFTHEGNKTFTDRLVNFEKMRMIANTVRIIRYCRSQPFDQEAPQATGKSHQDVRT
YVRHISVIDNQRSLSQLSHRLEPRRT
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggctggtttgctggtccctccctatggtgttatggacagcggcccaaacgctgacaga
atgcctgacaaagagaatctgagcaacagttctcctggactatcacccaagcacttaaat
aagaaatcattcattgaaaatcccatcaaagttcatcccaaacccattaatcaggtgccg
tcagagaagatacttcgggcaggaaaagtgctacgaaacatcattttatctcgagcgcct
catatgataagagacaggaaataccacctgaagacgtacaggcggagctgcatcggcact
gagctcgttgattggctgttgcagcacacatcatgtgttcactctcgtgttcaggctgta
gggatgtggcaggtgctgctggaggagggagtgcttaaccacgtggaccaggagccgact
ttccaagataaatatctgttttatcgctttctggatgacgaaagtgaggattcaggaatg
ccgagtgaggaagacaagaaggagagtgacgaagagctgcaggacacgcttctgctgctg
tctcagatcggccctgatgctcatctgcggatgatcctgcgcaaacaacccggccagagg
acggtcgatgacctggagatcatttatgaggagctgctgcacattaaagccttgtcccat
ctctccaccactgtgaagagggaactcgctggtgttttaatatttgagtcgcatgcgaaa
gcaggcacagtgttgttcaatcagggtgaagaagggacgtcctggtacatcatcctgaag
ggctccgtcaatgtggtcatctatggaaagggtgtggtgtgtactctacatgagggtgat
gatttcgggaagctggctctggtgaatgacgctcctcgggccgcctccatcgtgctgaga
gaagacttctgccacttcctcagggtggataaagaagacttcaacagaatcctcagggat
gtggaggcaaacactgtccgtctgaaggaacatgaagaggacgtgctggttttggagaaa
gctaacaacaggagctccagttcttctcctctcaagtacactgtgatgtcaggaactcca
gagaagattctggagcaccttctggagaccatgaaacttgattgccaattctcagagtca
gatcctgctctggatgactttctgctcatgcactgtgtttttgtcccgaacagtcagctg
tgtccactgctcatgacccattatcacgctcaggcgtcccagggcagtgaacaggagcgg
atggattacactctcaataacaagcgcagggtggtgcgtctggtgttacagtgggcctcc
atcaacacggaccacctgcaggaggaggacagctccttcagcttcatacaggagttttat
gagatggtgtgtgaagactccaggctcactccagccctgaaggaccatctgcccgaactg
gagaagatcatcaagcagaactcagatgacggcagaccctctcagaaaaagcacaaagtc
ctgctgcgtcagttcagcacagggaacgacaggcttcagaagagacagcccatcaaaagc
acagacgagatcctcttcaaggtgtactgcagtgatcacacctactctactatccgtgtg
cccgtgtctgcatccgtcagagaggtcatcgctgctgtatccgacaaactgagctcagga
gacgatctgctgctcatccatctcaactcagctggagataaagagcttctgaagccgtct
gatgtttccatcttctcatctctcagcattaatggccgtctgttcgtctgcccgagggac
caaatcgactctttgacgccgctgcccgagcaggagggaccgtctgcaggctccatgtcc
acgtttgagctcatgagctctaaagatctggcccatcagatgaccctctacgactgggag
ctcttccactgtgtgcatgagcatgagctgatctaccacacgttcggccgacatcatttt
aagaagaccaccgccaatctggacctgttcctgcggcgcttcaatgaggtgcagctgtgg
gtggtgacggaggtctgtctgtgtcccgcgctcagcaaacgagtgcagctcctcaagaag
ttcatcaagatcgctgcacactgtaaggagtttaagaacctgaactcattctttgccatt
atcatgggtctgggaaaccctgcggtctgtagactcagtcagacatgggagaagctgccc
agcaaattcaagaagttttatggagagtttgaaaacctaatggatccctccagaaatcac
agagcatatcgacttacaatggccaagctagaaccccccatcatccccttcatgccctta
ttaattaaagacatgactttcacacacgagggaaacaagaccttcactgaccgactggtc
aactttgagaagatgagaatgattgcaaacacagtcagaatcataagatactgcagaagt
caaccatttgatcaggaagctccgcaggcgacgggtaaaagccatcaggacgtgcgcact
tacgtccgccacatcagcgtgatcgataaccagcgcagtctatcacagctgtcccaccgt
ctagagccccggcggacatga
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