Danio rerio (zebrafish): 559529
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Entry
559529 CDS
T01004
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta precursor
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04010
MAPK signaling pathway
dre04020
Calcium signaling pathway
dre04510
Focal adhesion
dre04518
Integrin signaling
dre04519
Cadherin signaling
dre04540
Gap junction
dre04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
559529 (pdgfrb)
04020 Calcium signaling pathway
559529 (pdgfrb)
09133 Signaling molecules and interaction
04518 Integrin signaling
559529 (pdgfrb)
04519 Cadherin signaling
559529 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
559529 (pdgfrb)
04540 Gap junction
559529 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
559529 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dre01001
]
559529 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
dre04090
]
559529 (pdgfrb)
Enzymes [BR:
dre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
559529 (pdgfrb)
Protein kinases [BR:
dre01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
559529 (pdgfrb)
CD molecules [BR:
dre04090
]
Proteins
559529 (pdgfrb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
Ig_2
VEGFR1-3_N_Ig-like
ig
Ig_VEGFR-1-like_5th
C2-set_2
Adeno_E3_CR1
RIFIN
VEGFR-1-like_Ig-like
ICAM_N
Motif
Other DBs
NCBI-GeneID:
559529
NCBI-ProteinID:
NP_001177862
ZFIN:
ZDB-GENE-030805-2
Ensembl:
ENSDARG00000100897
UniProt:
A0A8M1NX88
D9MNA7
LinkDB
All DBs
Position
14:complement(3685182..3761094)
Genome browser
AA seq
1064 aa
AA seq
DB search
MKSSTISRIHFLFTAITTGLVLLCLGTSGLELSPSAPQIILSINSSSSITCSGWSNVTWR
FRRDENIPDFRTEELSASSSVLHLEQVTWRHTGVYVCTEKKTNESREVAVFVPDPDVWFL
ENEHVMVTKTREEGTIPCLVTNPSINVTLYERDTEMAVEGSYNPSVGYSAALDDRTYICK
GELNGEEKESDLFYVFSILAPEALDPYINASKTVLKQGETLNVNCTVHGVELVFFSWDFP
NKDMGGIEPLTDVLSSMSMRSCLNITDVSLDRSGQYVCHVHEGVQDQRASASINITVLEK
GFVSLTPPLDRNISAQLGENVELKVEIEAYPKPTVQWRKDGAVIRGHSMREEHETRFVST
LTLVRTRLQQMGLYKVTVQNEDALKEMIFDLEVKVPPQITELSDHHLPEKKHAVTCVAEG
VPKPSIQWFSCDSMTRCSNRSAVWSPLVEDPESVTIQTNVTYNSTRKIHQVLSQVTLVRP
QLLTIRCEASNERGARARDIRLVNSTLFSQVAVLAAVLALVVIVIISIIILIAVWRKKPR
YEIRWKVIESVSLDGHEYIYVDPIHLPYDLAWEMPRDSLVLGRTLGSGAFGRVVEATAYG
LGISQSATKVAVKMLKSTARRSETQALMSELKIMSHLGPHINIVNLLGACTKQGPLYLVT
EYCRYGDLVDYLHRNKHSFLQNFADKNHIAHGTQICNDSDSGKEYVSFGSECDGGYMDMT
KDEQTEYVPMQELADTIKYADIQPSPYESPYQQEIYQEQGPRVDHPLVISDSPVLSYTDL
VGFSYQVAQGMEFLASKNCVHRDLAARNVLICEGKLAKICDFGLARDIMHDNNYISKGST
FLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYSALKRGYRM
AKPSYASDEIYEVMRKCWDEKYEKRPEFSFLVHTMGNMLSDAYKKKYSQVNDSFLKSDHP
AVARMKPRVPSPFPGAFSPQSPTPELTPRPQIDGEAPHNEYIIPIPDPKPEEETQDEPTA
AEIPSSSFSSDEETVSMEAPSTEPEREELLTEHFGSPEVEESFL
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgaagagttcgaccatcagccgcatccacttcctattcactgctatcacaacaggactg
gttctgctctgtctgggcacttcaggtctggagctcagtcccagcgctccacagatcatc
ctgtccatcaactcgtcctccagcatcacctgctccggctggagtaacgtcacctggcgc
ttcaggcgggacgagaacatcccagactttcgcacagaggagctcagcgcctcctccagc
gtcctgcatctggagcaggtgacctggagacacaccggggtttatgtgtgcaccgagaag
aagaccaatgaatccagagaggtggccgtctttgtgcctgatcctgacgtgtggttcctg
gagaatgaacacgtgatggtgactaagacgcgagaggaaggcacgatcccatgtctggtg
acgaacccatcaataaacgtcacgctgtacgagagggacaccgagatggcagtggagggc
tcttataaccccagcgtgggctacagcgccgccctggatgacagaacctacatatgcaaa
ggagagctgaatggagaggaaaaagagtcagatctcttctacgttttcagtatactggct
cccgaggctctggatccctacatcaacgcctccaaaacggtcctaaagcagggcgagacg
ctcaacgtcaactgcaccgttcacggcgtggagctggtcttcttctcctgggattttccc
aacaaagacatgggaggcatcgagcccctgacggacgtcctgtcctccatgagcatgagg
tcatgtctgaacatcacagacgtctctctggacagatctggacagtacgtttgtcatgtt
catgagggagtgcaggaccagagagcttcagccagcatcaacatcactgtactggagaag
ggttttgtgtctctgactcctcctctggacagaaacatctctgcgcagctcggagaaaac
gtggagctgaaggtggagatcgaggcgtatcccaaacctacagtccagtggaggaaagac
ggtgctgttatcagaggacacagcatgagggaggagcacgaaacgaggtttgtcagcaca
ttgaccctggtcagaactcgactgcagcagatgggtctctacaaagtcaccgtccaaaat
gaagacgccctcaaagagatgatctttgacctagaggtgaaagttcctcctcagataacg
gagctgtcagatcatcacctgccggagaagaagcacgcagtgacctgtgtggcagaagga
gtgcccaaacccagcattcagtggttcagctgcgacagcatgaccaggtgcagtaacaga
agtgctgtatggagccctctagtggaggatccagagagcgtcaccatccagactaatgtc
acctacaacagcacacgcaagatccaccaggtgcttagtcaggtgacgctggtccggccg
cagttgctcaccatccgctgtgaggccagcaatgagagaggagcccgagcccgggacatc
agactggtcaacagcacgctgttctctcaggtagctgttctggccgctgtcttagcgctg
gtggtcatcgtcatcatctccatcatcatcctcattgctgtgtggaggaagaagccgcgg
tatgaaatcaggtggaaggtgattgaatcagtcagtttggatggacacgagtacatctac
gttgaccccattcatctgccctatgacctggcctgggagatgccacgcgacagtttggtg
ctgggtcgtacattaggttctggggcattcggtcgtgttgtcgaggcaacagcgtatggt
cttggcatttcccagtcggccactaaagtggcagtgaaaatgctcaaatcaacggctcgc
agaagtgagacacaagcgctgatgtctgaactcaagatcatgagtcatctgggtcctcac
atcaacatcgtcaacctgctgggcgcctgcacaaaacaaggtccgttatatttggtgaca
gaatactgccgatatggagatctggtggactacctgcacagaaacaaacacagcttcctc
cagaacttcgccgataaaaaccacatcgccaatggcactcagatctgcaacgacagtgac
agtgggaaagagtatgtgtcgttcggcagcgagtgtgatggaggttacatggacatgacc
aaagacgagcagactgaatacgtcccgatgcaggagctcgcggacactatcaagtacgca
gacatccagccgtcaccctacgagtctccgtaccagcaggacatctaccaggagcaaggt
cacagggtggatcattctctggtcatcagtgattctccggttctcagctatactgatctg
gttggttttagttaccaggtggcccaaggcatggagttcctggcctcaaagaactgtgtc
catcgagatctggccgcaagaaatgtcctgatctgtgaaggcaaactggccaagatctgc
gactttggcctggccagagacatcatgcacgacaacaactacatctccaaaggcagcacc
tttcttcctctgaagtggatggcgcccgagagcatctttcataacctgtacacgactctg
agtgacgtctggtcttacggcatcttactgtgggagatcttcaccctcggagggaccccg
tatccagacctgccaatgaacgagttgttttacagcgccctgaaaagaggataccgcatg
gccaaaccctcgtacgcctctgacgaaatttatgaggtcatgaggaaatgttgggatgag
aagtacgagaagcggcccgagttctcctttctggtgcacaccatggggaacatgctctca
gacgcatataaaaagaaatactctcaggtgaacgacagttttctgaagagcgatcaccca
gcggtggctcgcatgaagccgagggtcccgtctccgttcccaggagccttttctcctcaa
tctccaacaccagagctgaccccgcgtccacagatcgacggagaggctccacacaacgag
tacatcatccccatccctgatcccaaaccagaggaagaaacccaggacgagccgacggca
gcagaaatcccctcgagctccttcagctctgacgaggagacggtgtctatggaggccccg
agcactgaacctgagcgcgaggagctgctgaccgaacactctggaagtccagaagtagag
gagagcttcctgtga
DBGET
integrated database retrieval system
