Danio rerio (zebrafish): 562072
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Entry
562072 CDS
T01004
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
562072 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dre04990
]
562072 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
dre04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
562072 (ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_2
EGF_MSP1_1
TNFR_nem
Motif
Other DBs
NCBI-GeneID:
562072
NCBI-ProteinID:
XP_017207300
ZFIN:
ZDB-GENE-091202-8
Ensembl:
ENSDARG00000056922
UniProt:
A0A8M6Z2F6
LinkDB
All DBs
Position
17:24280281..24442220
Genome browser
AA seq
1527 aa
AA seq
DB search
MAMLVWDIIVSVTLLISPAFLSADQSGFRKLYVVQPGPSGTDGVHVSSISSLSGASGQPH
SYNVELKASFGGQVRTRRMGHQQNPSIPIRQDAQSGRHTSSHHMKVSGVNVCGGQCCVGW
SKTPGSQRCTKPNCTPPCKNGGMCLGPHMCVCKPGSKGKSCEQTTLPPSSHPTGPLNGHT
NGGVPNGGHTNGYSNGHNVIPQRPIPQQIFPQGQGQVPLPLPGTNVGHLTLSMKPSVNGP
IPYQPQIQNPVSMTMHQSKSQKFLVQQKNYHTHTQMQGVGPTLNRAIPLSVGHNPIHVGN
HTGRIKVVFTPTICKMTCTNGRCQNSCQKGNTTTIISENGHATDTLTAPNFRVVVCHLPC
MNGGKCSTRDKCQCPPNFTGKFCQMASPNGHQGQHTVVNGQKTHVHSTHTLPLTYGTGQN
QGMVNVHVKHPPEASVQIHQVSPVDSNGQVKNTQSSHSFTYHSSSQSIQHGHTHSGVIYP
NQQTYLQYQPVTSKSQLGRCFQETTGMQCGKALPGLSKQDACCGTVGTSWGFHKCQKCPK
KPSIPLIECPQGYKRLNGTRCIDIDECQLQGVCPNGNCINTVGSYRCICNPGFVPDPSLT
SCFPETPALREEKGACFRFVGSGKQCLHPVSTQLSKQLCCCSVGKAWGPHCDRCPLPGTA
AFKDICPGGMGYHVTPPYIYKPKPPNGHTQTDGQGYNNPTIRHQVPMDPPVPFPTLQQPV
EALSITERQLPEVVEKVSPPAPVAIPPSNEGQDITPTQLAEIDECVVRPDICGAGICYNT
AESYTCFCDDGYRTDSEGTTCVDVDECAENPSLCANGRCQNTPGGFLCVCELGFMPNERG
SSCSDIDECQNRRACPSGLCYNTLGSFMCSPCPDGFEGKNGQCVDINECLDERVCAHGQC
SNLEGYFVCTCDEGFLPTPDGKSCTDIDECQDDNVCIQGHCQNTQGSFICNCEPGFKLSS
SGDQCEDVDECLVIPQTCDGVGQCVNILGSYQCNCPQGYRQVNSTSCLDVDECEDDTQLC
IPNGECLNTEGSFLCVCDAGFVSTRTGCQDVDECSLNENTCGSHGTCQNTIGSFICQCDP
GFKDSQDGQGCVDVNECELLGNVCGEATCENREGTFLCLCPDDLQEFDPMLGKCISTPPV
TTVERKECYFNLNDENLCDKVLASSMTKEECCCTLGAGWGDNCEVHPCPIPGTDQFSQMC
PAGRGYLISGDPMSTTSSLAENTKADADECQLFGSEICKDGFCLNTAGWYECYCKSGLYY
DESKLQCLDTDECQDEAKCRDGECMNTYGSYQCFCTPPMVLAMDNTHCILPDVAGQSEAD
LYSGVCWERVTENFSCANPITNIHTSFTECCCLYGEAWGNDCALCPGKNTDSYAQMCNIR
RPYGRDALVAGPIGVSPDYNPQPLNPDGMLPYIEDYDEPRNPYDAFEGLRAEECGVLNGC
ENGRCVRVQEGYTCDCFDGYTLDMSRMACVDINECSELNAKMSLCKNGNCINTQGSYKCV
CLPGFILSAQHNYCVPHRQNATSTGTE
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atggctatgctcgtgtgggacatcattgtttctgttacgttattaatttctccggctttt
ctttcggcggatcagagcggcttcaggaaactgtacgttgtgcaaccgggaccgagcggt
acagacggggttcacgtgagctccatttcatcgctctcgggagcgtcgggacagccacac
tcatacaatgtggagctgaaagccagcttcggtggccaggtccggacccgcagaatgggt
caccagcagaacccgagcattccgatccgccaggacgcgcagtctggccgacacacatcc
agccatcacatgaaagtgtcaggagtgaacgtctgtggggggcagtgctgtgttggttgg
agcaagaccccaggatctcagcgctgcactaaacctaactgtacacccccatgcaaaaat
ggagggatgtgcttggggccccacatgtgtgtgtgtaagccaggctctaaaggcaagtcc
tgtgaacagaccactctccctccatcctctcatccaactggaccactaaatggacacacc
aatggtggagtcccaaatggaggtcatacgaacggatactccaacggtcataatgtaatt
ccccagcgccccattcctcagcagatcttcccacaggggcaaggtcaagtaccattacca
ctgcccggcaccaacgttggacatttaactctgtccatgaagccgtcagttaatggaccc
attccatatcaaccacaaatacaaaacccagtttcgatgacgatgcaccagagtaagtcc
caaaagtttttggtccagcagaaaaactaccacacacacacgcagatgcaaggagtggga
cccaccttgaaccgtgccatcccgctgtcagtgggccacaacccaattcatgtggggaac
cacacaggccggatcaaggtggtcttcactccgactatctgcaagatgacctgcaccaac
ggccgctgtcagaacagctgtcagaagggaaacaccaccactatcatcagtgagaacgga
cacgccaccgacacgctcaccgcccccaacttcagagttgttgtttgccatttgccctgc
atgaatggtggaaaatgcagcactcgggataagtgccagtgcccgccaaactttactgga
aaattctgccaaatggcgagtccaaatggtcaccaggggcagcatactgttgtaaatggg
cagaagacacatgtccactcaacacacacgttacccctcacttatggcactggacaaaac
caaggtatggtgaatgtccatgtgaaacatcctcctgaagcctcggtccagattcatcag
gtgtctccagtggacagtaatggacaagtgaagaacacgcagtccagccattccttcacc
taccacagcagcagccagagcatccagcatgggcacactcacagtggtgtcatttacccc
aaccagcaaacatacctccaataccagcctgtcacatccaagagccaactaggacgctgc
ttccaggagactaccggaatgcagtgtgggaaagctctgcctggactatctaaacaggat
gcctgttgtgggacggtgggcacatcatggggattccacaaatgccaaaaatgccccaag
aaaccatcgattcctttgattgaatgtcctcaaggctataaaagactgaatggcactcgc
tgtatcgacattgatgaatgtcagcttcaaggtgtttgtccaaatggaaactgcatcaac
actgtgggcagctataggtgtatctgcaacccaggctttgtgcctgatccatcactgacg
tcctgcttccccgaaacacctgctcttcgcgaggagaagggtgcttgcttccggtttgtc
ggttcagggaagcagtgcttgcaccctgtgtccactcagctgagtaaacagttatgctgt
tgtagtgtgggcaaggcctggggtcctcattgtgaccgctgtcctctacctgggacagct
gcgtttaaagacatttgtcctggaggtatgggttaccacgtcaccccaccatacatttac
aagcccaaacctcctaatggacacactcagacagacggtcaggggtacaacaatcccacc
atcagacaccaagtccctatggatcctccagtacccttccctaccctccagcagcccgtg
gaggctctgagcatcacagagagacagctgcctgaggtggtggagaaagtgtcaccaccg
gctccagtggcaattccaccttccaatgaaggtcaggacattaccccaacacagctggct
gagattgacgagtgtgtagtgagacctgatatctgtggtgcaggaatctgttataacact
gctgagagctacacatgcttctgtgatgacggctatagaacggacagtgagggcaccaca
tgtgtagatgtcgacgagtgtgcggagaacccaagtttgtgtgctaatggccgctgtcag
aacactccaggcggattcctgtgtgtatgtgagcttggcttcatgcctaacgagaggggc
agcagctgttccgatattgatgaatgtcagaacaggagagcgtgtccatctggtctctgc
tataacactttgggctcattcatgtgttctccctgtccggatgggtttgaaggaaaaaac
ggccaatgtgtagatataaatgagtgtctggatgaaagagtgtgcgctcatggtcagtgc
tctaatctggagggctatttcgtctgcacgtgtgatgaagggttcttgcccactcctgac
ggcaaaagctgcacagacattgatgaatgtcaggacgataacgtgtgtatccaaggtcac
tgtcaaaacacacaggggtcattcatctgcaactgtgagcctggcttcaaactgtcgtcc
tcaggagaccaatgtgaagatgtggatgagtgtttggtgatacctcagacctgtgatggt
gtgggccagtgcgtcaatatcttagggtcttaccagtgcaattgcccacaggggtataga
caagtcaatagcaccagctgccttgatgttgatgaatgtgaagatgatacacaactgtgt
atcccgaatggagaatgtttgaacactgagggttcattcctgtgtgtgtgtgatgctggc
tttgtgtccaccaggacaggctgtcaggatgtggatgagtgttctctgaatgagaatacc
tgtggaagtcatggtacttgtcagaatacaataggctccttcatctgccagtgcgacccg
ggatttaaggactctcaggatgggcagggctgtgtggatgtgaatgagtgtgagcttctc
ggtaatgtgtgtggtgaagccacctgtgagaaccgtgaaggcaccttcctgtgtttgtgt
cctgatgacctgcaagagtttgacccaatgcttggcaaatgcatctctacacctccagtc
acaacagttgagaggaaagagtgttacttcaacctgaatgatgaaaacctttgtgataag
gttctggccagcagcatgactaaagaggagtgctgctgtacactgggagcaggatgggga
gacaactgtgaggtccatccctgccccataccgggaacagatcagttctcacagatgtgt
ccagcaggccggggttacctgatttctggagatcctatgagtactacctccagcttagca
gaaaacaccaaagcagatgcagatgaatgccagctctttggaagtgagatctgtaaagat
ggcttttgtctcaacaccgctggctggtacgagtgttactgcaaatctggactctactac
gatgagagcaaactacagtgtctcgacactgatgaatgccaagatgaggcaaaatgtaga
gatggtgaatgcatgaacacatatggctcatatcagtgtttctgcacccctcctatggtt
ctggcaatggacaacacacactgcatattacccgacgtagcagggcaaagtgaagctgac
ttatactcaggggtttgctgggagagagtaactgaaaacttctcctgcgcaaatcctatc
accaacatacacacctcattcacagagtgctgctgtttgtatggagaggcctggggcaac
gattgtgctctctgccctgggaaaaatacagactcctatgcccaaatgtgtaatatccgt
cgaccgtatggtcgggatgctctggtcgctggcccaattggggtcagccctgattataac
cctcaacctctgaatcctgacggcatgcttccatacattgaagattacgatgaaccaaga
aatccatatgatgcatttgaaggactgcgagcagaggagtgcggtgtgctgaacggatgc
gagaacggtcggtgtgtgcgggtacaggagggatacacctgtgactgcttcgatggatac
acactcgacatgtcccgcatggcctgcgtggatatcaacgaatgctccgagctgaacgca
aagatgtctctttgcaagaacggcaactgcatcaacacacaaggctcttataagtgtgtg
tgccttccaggattcatcctctctgcccagcacaactactgcgtgccccacagacaaaat
gccaccagtacgggcacagagtga
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integrated database retrieval system
