Danio rerio (zebrafish): 563989
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Entry
563989 CDS
T01004
Symbol
trpc6a
Name
(RefSeq) short transient receptor potential channel 6a
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
563989 (trpc6a)
Ion channels [BR:
dre04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
563989 (trpc6a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
DUF6744
Motif
Other DBs
NCBI-GeneID:
563989
NCBI-ProteinID:
NP_001025453
ZFIN:
ZDB-GENE-040724-114
Ensembl:
ENSDARG00000056625
UniProt:
Q6ZM90
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Position
21:complement(22800753..22813606)
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AA seq
855 aa
AA seq
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MNQRRAVLEDKNQSKYHSIEKRNRSKDNLLMNEHFGEDCYGSYGNYHGENVARQALPKSR
RQAVRGAAYMFNAHPNSLTPLEERFLDAAEYGNIPVVRRMLEELPELDVNCVDYMGQNAL
QLAVANEHLEVTELLLKKDNLSRIGDALLLAISKGYTRIVEAILSHRAFADSRRLTASPS
QAPMHDDFFAYDEDGTRFSHDVTPVILASHCHEYEIVHILLGKGARIEQPHDYFCTCDTC
NYHQKYDSFCHSRSRINAYRGLASPAYLSLSNEDPVLAALELSNELASLANIEKEFKNEY
RKLSMQCKDFVVGLLDLCRSTEEVEAILNGEEDDTLELPGRPSLIRLKLAIKYELKKFVA
HPNCQQQLLSIWYEHLPELRQQTTAIKFLVVLGVAMGLPFLAMVYWVAPCSKMGKIMRGP
FLKFVAHAASFTIFLGLLVMNAADRFDGTKLLPNMTIHDYPTQLFRMKTTPFTWMEMLII
SWVIGMIWAECKEIWSQGPREYLLEPWNLLDFGMLAIFVASFISRIMAFWHASSAQRYVD
EHYTDLTNVVLPFEVGYFQRARIDWLPSDPQLVSEGLYAIAVVLSFSRIAYILPANESFG
PLQISLGRTVKDIFKFMVIFILVFLAFMIGMFNLYSYYRGAKQNEAFTTVEESFKTLFWA
IFGLSEVKSVVVNNGHKFIENIGYVLYGVYNVTVVIVLLNMLIAMINNSFQEIEDDADVE
WKFARAKLWFTYFEEGRTLPVPFNLIPSPKSVLSLVMGVKGLLRELSVRQKAIMKGSELS
EKIMKRLVKRYIIKAQNDKECDEVNEGELKEIKQDISSLRYELLEEKSHNMEELAKLVRT
LEKNLSQDCLVMKSH
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaagaagagctgttcttgaggataaaaatcaatcaaagtatcactcgatcgaa
aagaggaacagaagtaaggacaatctactgatgaacgaacactttggcgaggactgttat
ggcagttatggaaactaccatggtgagaacgtggcccgtcaggcgctgcccaagagccgc
aggcaggcggtgcgaggagcggcttacatgttcaacgcccatccgaatagcttgaccccg
ctggaggagcgcttcctcgatgctgctgagtatgggaacatcccagtggtgcgcaggatg
ctggaggagctgccggagctggacgtaaactgtgtggactacatgggccagaatgcactg
cagctcgcggtggccaacgagcacctggaggtgacagagctcttgttaaaaaaagacaac
ctgtcacgtatcggggatgctcttttgttggccatcagcaaaggttacaccaggattgtg
gaagccattttaagccacagagctttcgcggactcaaggagactcaccgcgagccccagc
caggccccgatgcacgatgacttcttcgcctacgacgaagatggcacgcgcttttctcat
gacgtcactccagtcattctagcctctcactgtcacgagtacgagatcgtgcacatactt
ttgggaaagggtgcgcgcattgagcagcctcatgattacttctgtacctgcgacacctgt
aattatcatcaaaagtacgattccttctgtcactcccgctcgaggatcaacgcttacaga
ggattggccagtccggcttacctctctctgtccaatgaggatccagtgttggcggccctg
gagctcagcaatgagctcgcatccttggccaatattgaaaaggaatttaagaatgaatac
aggaaactttctatgcaatgcaaagactttgtggtgggtcttctggacctgtgtcggagc
actgaggaagtggaagccattttgaatggagaagaggatgacactttggaattacctggc
cgaccgagcctcattcgcttaaaactggcaataaagtatgaacttaaaaagtttgtggcc
catcctaactgtcaacaacagctcttgtcaatatggtacgaacacttacctgaactcagg
cagcagaccacagctattaagttcctagtagttttaggtgttgcgatgggacttcctttt
ctagcaatggtgtattgggtggcaccatgcagcaagatgggaaagatcatgcgtggccct
ttccttaagtttgtggcacatgcggcctcctttactattttccttggccttttggtcatg
aacgctgccgaccgctttgatgggacaaagcttcttccaaatatgaccatccatgactat
ccgacacagctgtttcgtatgaaaacaactcccttcacgtggatggaaatgctcatcatt
tcctgggtcatagggatgatttgggcagagtgcaaggagatctggtcccaaggaccaaga
gaatatctgcttgagccttggaacttgctagactttggaatgttggccatttttgtggca
tccttcatctcaaggataatggctttctggcatgcaagttcagcccaacgctatgttgat
gagcattacacagatctaaccaatgtagtattaccttttgaggtgggatacttccagcgg
gctcggattgactggcttccatcagatcctcagttagtctcagagggcttgtatgccatt
gcagtggtgctgagtttttctcgaattgcctatattctgccagctaatgagagctttgga
ccactgcaaatatctttgggacgaactgtgaaggacatcttcaagttcatggttatcttc
atcctagtctttctggccttcatgattggaatgttcaacctctactcatattatcggggt
gcaaaacagaatgaagctttcacaactgtggaagaaagcttcaaaacattgttttgggca
atatttggcctttctgaggtcaaatcagtcgtggtgaacaatggacacaagttcatcgag
aacattggatatgttctctatggagtttacaatgtcacagtggtcatcgtcctactcaac
atgcttattgccatgatcaacaactcatttcaggagattgaggatgacgcagatgtggag
tggaagtttgcccgtgccaagctctggttcacctactttgaggagggcaggactctccct
gtgccttttaacctgattcccagtcccaaatcagttcttagtctggttatgggggtcaag
ggtctcctgcgagagctttctgtcaggcaaaaagccattatgaaggggtctgaactcagt
gagaaaattatgaagcgtcttgtgaagcgatacatcatcaaggctcaaaatgacaaggaa
tgtgatgaagtcaacgagggtgaactgaaggagatcaaacaggacatttcaagccttcgc
tatgaactgctggaggaaaagtcacacaacatggaggagctggcgaagctagtcaggaca
cttgaaaaaaacctctctcaggactgcttggttatgaagtctcactga
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